Gene : Glyma.08G157500 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11089:SF29 - P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN Genomic Order:  1575
Name:  ? Glyma.08G157500 Secondary Identifier:  ? PAC:30541236
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G157500 0.5kb upstream 0.5kb upstream 6696 true Chr08: 12198777-12205472 Glycine max
Glyma.08G157500 0.5kb upstream 0.5kb upstream 500 false Chr08: 12198777-12199276 Glycine max
Glyma.08G157500 0.5kb downstream 0.5kb downstream 6696 true Chr08: 12199277-12205972 Glycine max
Glyma.08G157500 0.5kb downstream 0.5kb downstream 500 false Chr08: 12205473-12205972 Glycine max
Glyma.08G157500 1.0kb upstream 1.0kb upstream 7196 true Chr08: 12198277-12205472 Glycine max
Glyma.08G157500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 12198277-12199276 Glycine max
Glyma.08G157500 1.0kb downstream 1.0kb downstream 7196 true Chr08: 12199277-12206472 Glycine max
Glyma.08G157500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 12205473-12206472 Glycine max
Glyma.08G157500 2.0kb upstream 2.0kb upstream 8196 true Chr08: 12197277-12205472 Glycine max
Glyma.08G157500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 12197277-12199276 Glycine max
Glyma.08G157500 2.0kb downstream 2.0kb downstream 8196 true Chr08: 12199277-12207472 Glycine max
Glyma.08G157500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 12205473-12207472 Glycine max
Glyma.08G157500 5.0kb upstream 5.0kb upstream 11196 true Chr08: 12194277-12205472 Glycine max
Glyma.08G157500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 12194277-12199276 Glycine max
Glyma.08G157500 5.0kb downstream 5.0kb downstream 11196 true Chr08: 12199277-12210472 Glycine max
Glyma.08G157500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 12205473-12210472 Glycine max
Glyma.08G157500 10.0kb upstream 10.0kb upstream 16196 true Chr08: 12189277-12205472 Glycine max
Glyma.08G157500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 12189277-12199276 Glycine max
Glyma.08G157500 10.0kb downstream 10.0kb downstream 16196 true Chr08: 12199277-12215472 Glycine max
Glyma.08G157500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 12205473-12215472 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308452 5265 Fabidae View MSA
124063765 5270 Rosid View MSA
123740367 5271 Pentapetalae View MSA
122786202 5272 Eudicot View MSA
122048659 5273 Angiosperm View MSA
121344077 5274 Embryophyte View MSA
123427603 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.17388 0.0 9.96249    
cufflinks 4.63959 0.0 13.8005    
cufflinks 3.38204 0.0 10.4762    
cufflinks 4.40813 0.0 13.1978    
cufflinks 3.39668 0.0 10.5608    
cufflinks 5.08487 0.0 14.9346   High
cufflinks 5.98612 0.0 17.2653   High
cufflinks 3.17141 0.0 9.9476    
cufflinks 2.73779 0.0 8.77662   Low
cufflinks 0.911        
cufflinks 0.472        
cufflinks 1.325        
cufflinks 1.093        
cufflinks 1.177        
cufflinks 0.19       Low
cufflinks 1.305        
cufflinks 0.47        
cufflinks 1.636       High
cufflinks 1.392        
cufflinks 1.313        
cufflinks 0.562        
cufflinks 1.398        
cufflinks 1.326        
cufflinks 0.457       Low
cufflinks 1.285        
cufflinks 0.477        

0 Strain