Gene : Glyma.08G158500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11527//PTHR11527:SF161 - SMALL HEAT-SHOCK PROTEIN HSP20 FAMILY Genomic Order:  1585
Name:  ? Glyma.08G158500 Secondary Identifier:  ? PAC:30537372
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G158500 0.5kb upstream 0.5kb upstream 1663 true Chr08: 12279922-12281584 Glycine max
Glyma.08G158500 0.5kb upstream 0.5kb upstream 500 false Chr08: 12279922-12280421 Glycine max
Glyma.08G158500 0.5kb downstream 0.5kb downstream 1663 true Chr08: 12280422-12282084 Glycine max
Glyma.08G158500 0.5kb downstream 0.5kb downstream 500 false Chr08: 12281585-12282084 Glycine max
Glyma.08G158500 1.0kb upstream 1.0kb upstream 2163 true Chr08: 12279422-12281584 Glycine max
Glyma.08G158500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 12279422-12280421 Glycine max
Glyma.08G158500 1.0kb downstream 1.0kb downstream 2163 true Chr08: 12280422-12282584 Glycine max
Glyma.08G158500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 12281585-12282584 Glycine max
Glyma.08G158500 2.0kb upstream 2.0kb upstream 3163 true Chr08: 12278422-12281584 Glycine max
Glyma.08G158500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 12278422-12280421 Glycine max
Glyma.08G158500 2.0kb downstream 2.0kb downstream 3163 true Chr08: 12280422-12283584 Glycine max
Glyma.08G158500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 12281585-12283584 Glycine max
Glyma.08G158500 5.0kb upstream 5.0kb upstream 6163 true Chr08: 12275422-12281584 Glycine max
Glyma.08G158500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 12275422-12280421 Glycine max
Glyma.08G158500 5.0kb downstream 5.0kb downstream 6163 true Chr08: 12280422-12286584 Glycine max
Glyma.08G158500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 12281585-12286584 Glycine max
Glyma.08G158500 10.0kb upstream 10.0kb upstream 11163 true Chr08: 12270422-12281584 Glycine max
Glyma.08G158500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 12270422-12280421 Glycine max
Glyma.08G158500 10.0kb downstream 10.0kb downstream 11163 true Chr08: 12280422-12291584 Glycine max
Glyma.08G158500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 12281585-12291584 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305571 5265 Fabidae View MSA
124060649 5270 Rosid View MSA
123750767 5271 Pentapetalae View MSA
122796138 5272 Eudicot View MSA
122051041 5273 Angiosperm View MSA
121312263 5274 Embryophyte View MSA
123349452 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.8696 0.0 74.7573 High  
cufflinks 13.9843 0.0 39.1599    
cufflinks 24.4765 0.0 65.7774 High  
cufflinks 12.1298 0.0 34.4955    
cufflinks 100.696 0.0 281.843 High High
cufflinks 10.5753 0.0 30.6042   Low
cufflinks 14.5205 0.0 40.706    
cufflinks 75.4747 0.0 206.737 High High
cufflinks 53.168 0.0 142.743 High  
cufflinks 5.171       Low
cufflinks 15.687     High  
cufflinks 17.991     High  
cufflinks 14.551     High  
cufflinks 8.239     High  
cufflinks 5.516     High Low
cufflinks 8.599     High  
cufflinks 42.783     High High
cufflinks 5.728       Low
cufflinks 12.066     High  
cufflinks 8.335     High  
cufflinks 10.13     High  
cufflinks 10.468     High  
cufflinks 13.179     High  
cufflinks 22.697     High High
cufflinks 8.335     High  
cufflinks 29.846     High High

0 Strain