Gene : Glyma.08G158800 G. max Wm82.a2.v1
Defline:  (1 of 14) PF06075 - Plant protein of unknown function (DUF936) (DUF936) Genomic Order:  1588
Name:  ? Glyma.08G158800 Secondary Identifier:  ? PAC:30539080
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G158800 0.5kb upstream 0.5kb upstream 4555 true Chr08: 12314156-12318710 Glycine max
Glyma.08G158800 0.5kb upstream 0.5kb upstream 500 false Chr08: 12314156-12314655 Glycine max
Glyma.08G158800 0.5kb downstream 0.5kb downstream 4555 true Chr08: 12314656-12319210 Glycine max
Glyma.08G158800 0.5kb downstream 0.5kb downstream 500 false Chr08: 12318711-12319210 Glycine max
Glyma.08G158800 1.0kb upstream 1.0kb upstream 5055 true Chr08: 12313656-12318710 Glycine max
Glyma.08G158800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 12313656-12314655 Glycine max
Glyma.08G158800 1.0kb downstream 1.0kb downstream 5055 true Chr08: 12314656-12319710 Glycine max
Glyma.08G158800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 12318711-12319710 Glycine max
Glyma.08G158800 2.0kb upstream 2.0kb upstream 6055 true Chr08: 12312656-12318710 Glycine max
Glyma.08G158800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 12312656-12314655 Glycine max
Glyma.08G158800 2.0kb downstream 2.0kb downstream 6055 true Chr08: 12314656-12320710 Glycine max
Glyma.08G158800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 12318711-12320710 Glycine max
Glyma.08G158800 5.0kb upstream 5.0kb upstream 9055 true Chr08: 12309656-12318710 Glycine max
Glyma.08G158800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 12309656-12314655 Glycine max
Glyma.08G158800 5.0kb downstream 5.0kb downstream 9055 true Chr08: 12314656-12323710 Glycine max
Glyma.08G158800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 12318711-12323710 Glycine max
Glyma.08G158800 10.0kb upstream 10.0kb upstream 14055 true Chr08: 12304656-12318710 Glycine max
Glyma.08G158800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 12304656-12314655 Glycine max
Glyma.08G158800 10.0kb downstream 10.0kb downstream 14055 true Chr08: 12314656-12328710 Glycine max
Glyma.08G158800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 12318711-12328710 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791748 5273 Angiosperm View MSA
122308607 5265 Fabidae View MSA
124061742 5270 Rosid View MSA
123741137 5271 Pentapetalae View MSA
122789057 5272 Eudicot View MSA
121350805 5274 Embryophyte View MSA
123381891 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.306195 0.0 1.15213    
cufflinks 1.59487 0.0 5.32179   High
cufflinks 0.979668 0.0 3.44736    
cufflinks 0.945752 0.0 3.32649    
cufflinks 0.394739 0.0 1.46523    
cufflinks 0.223114 0.0 0.851154 Low  
cufflinks 0.586642 0.0 2.13325    
cufflinks 0.0741933 0.0 0.295409 Low Low
cufflinks 0.267946 0.0 1.01337    
cufflinks 0.043     Low Low
cufflinks 0.079        
cufflinks 0.962        
cufflinks 0.292        
cufflinks 0.778        
cufflinks 0.047     Low Low
cufflinks 1.706        
cufflinks 0.046     Low Low
cufflinks 1.528        
cufflinks 2.042        
cufflinks 2.89       High
cufflinks 0.045     Low Low
cufflinks 2.358       High
cufflinks 2.385       High
cufflinks 0.051     Low Low
cufflinks 1.651        
cufflinks 0.138        

0 Strain