Gene : Glyma.08G159500 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR22600//PTHR22600:SF14 - BETA-HEXOSAMINIDASE Genomic Order:  1595
Name:  ? Glyma.08G159500 Secondary Identifier:  ? PAC:30536582
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6902 Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G159500 0.5kb upstream 0.5kb upstream 4436 true Chr08: 12372387-12376822 Glycine max
Glyma.08G159500 0.5kb upstream 0.5kb upstream 500 false Chr08: 12372387-12372886 Glycine max
Glyma.08G159500 0.5kb downstream 0.5kb downstream 4436 true Chr08: 12372887-12377322 Glycine max
Glyma.08G159500 0.5kb downstream 0.5kb downstream 500 false Chr08: 12376823-12377322 Glycine max
Glyma.08G159500 1.0kb upstream 1.0kb upstream 4936 true Chr08: 12371887-12376822 Glycine max
Glyma.08G159500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 12371887-12372886 Glycine max
Glyma.08G159500 1.0kb downstream 1.0kb downstream 4936 true Chr08: 12372887-12377822 Glycine max
Glyma.08G159500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 12376823-12377822 Glycine max
Glyma.08G159500 2.0kb upstream 2.0kb upstream 5936 true Chr08: 12370887-12376822 Glycine max
Glyma.08G159500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 12370887-12372886 Glycine max
Glyma.08G159500 2.0kb downstream 2.0kb downstream 5936 true Chr08: 12372887-12378822 Glycine max
Glyma.08G159500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 12376823-12378822 Glycine max
Glyma.08G159500 5.0kb upstream 5.0kb upstream 8936 true Chr08: 12367887-12376822 Glycine max
Glyma.08G159500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 12367887-12372886 Glycine max
Glyma.08G159500 5.0kb downstream 5.0kb downstream 8936 true Chr08: 12372887-12381822 Glycine max
Glyma.08G159500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 12376823-12381822 Glycine max
Glyma.08G159500 10.0kb upstream 10.0kb upstream 13936 true Chr08: 12362887-12376822 Glycine max
Glyma.08G159500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 12362887-12372886 Glycine max
Glyma.08G159500 10.0kb downstream 10.0kb downstream 13936 true Chr08: 12372887-12386822 Glycine max
Glyma.08G159500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 12376823-12386822 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254233 5265 Fabidae View MSA
124063455 5270 Rosid View MSA
123738859 5271 Pentapetalae View MSA
122789804 5272 Eudicot View MSA
122047899 5273 Angiosperm View MSA
121347698 5274 Embryophyte View MSA
123428053 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.7328 0.0 8.44553    
cufflinks 4.75416 0.0 13.6875    
cufflinks 4.57957 0.0 13.2248    
cufflinks 50.8074 0.0 145.954 High High
cufflinks 2.10188 0.0 6.72915    
cufflinks 1.46994 0.0 4.94577    
cufflinks 75.4841 0.0 230.763 High High
cufflinks 3.01747 0.0 9.17438    
cufflinks 1.7643 0.0 5.80109    
cufflinks 1.169        
cufflinks 0.086       Low
cufflinks 2.798       High
cufflinks 1.451        
cufflinks 0.693        
cufflinks 0.155       Low
cufflinks 0.953        
cufflinks 0.466        
cufflinks 3.441       High
cufflinks 2.704       High
cufflinks 1.355        
cufflinks 0.156       Low
cufflinks 1.352        
cufflinks 1.711        
cufflinks 0.169       Low
cufflinks 1.055        
cufflinks 0.25        

0 Strain