Gene : Glyma.08G148800 G. max Wm82.a2.v1
Defline:  (1 of 58) KOG0483 - Transcription factor HEX, contains HOX and HALZ domains Genomic Order:  1488
Name:  ? Glyma.08G148800 Secondary Identifier:  ? PAC:30538012
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G148800 0.5kb upstream 0.5kb upstream 3107 true Chr08: 11392379-11395485 Glycine max
Glyma.08G148800 0.5kb upstream 0.5kb upstream 500 false Chr08: 11392379-11392878 Glycine max
Glyma.08G148800 0.5kb downstream 0.5kb downstream 3107 true Chr08: 11392879-11395985 Glycine max
Glyma.08G148800 0.5kb downstream 0.5kb downstream 500 false Chr08: 11395486-11395985 Glycine max
Glyma.08G148800 1.0kb upstream 1.0kb upstream 3607 true Chr08: 11391879-11395485 Glycine max
Glyma.08G148800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 11391879-11392878 Glycine max
Glyma.08G148800 1.0kb downstream 1.0kb downstream 3607 true Chr08: 11392879-11396485 Glycine max
Glyma.08G148800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 11395486-11396485 Glycine max
Glyma.08G148800 2.0kb upstream 2.0kb upstream 4607 true Chr08: 11390879-11395485 Glycine max
Glyma.08G148800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 11390879-11392878 Glycine max
Glyma.08G148800 2.0kb downstream 2.0kb downstream 4607 true Chr08: 11392879-11397485 Glycine max
Glyma.08G148800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 11395486-11397485 Glycine max
Glyma.08G148800 5.0kb upstream 5.0kb upstream 7607 true Chr08: 11387879-11395485 Glycine max
Glyma.08G148800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 11387879-11392878 Glycine max
Glyma.08G148800 5.0kb downstream 5.0kb downstream 7607 true Chr08: 11392879-11400485 Glycine max
Glyma.08G148800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 11395486-11400485 Glycine max
Glyma.08G148800 10.0kb upstream 10.0kb upstream 12607 true Chr08: 11382879-11395485 Glycine max
Glyma.08G148800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 11382879-11392878 Glycine max
Glyma.08G148800 10.0kb downstream 10.0kb downstream 12607 true Chr08: 11392879-11405485 Glycine max
Glyma.08G148800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 11395486-11405485 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296477 5265 Fabidae View MSA
124071964 5270 Rosid View MSA
123750745 5271 Pentapetalae View MSA
122796686 5272 Eudicot View MSA
122050134 5273 Angiosperm View MSA
121351534 5274 Embryophyte View MSA
123382211 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.8242 0.0 6.08902    
cufflinks 3.21741 0.0 9.90314    
cufflinks 2.71424 0.0 8.56615    
cufflinks 2.47958 0.0 7.90852    
cufflinks 2.91072 0.0 9.10094    
cufflinks 4.58258 0.0 13.4776   High
cufflinks 1.23613 0.0 4.30108   Low
cufflinks 2.20776 0.0 7.13656    
cufflinks 5.03215 0.0 14.5723   High
cufflinks 2.141        
cufflinks 21.42     High High
cufflinks 3.176        
cufflinks 4.181        
cufflinks 0.645       Low
cufflinks 3.746        
cufflinks 1.413        
cufflinks 12.489     High High
cufflinks 3.058        
cufflinks 2.569        
cufflinks 0.807       Low
cufflinks 15.117     High High
cufflinks 1.03        
cufflinks 1.144        
cufflinks 29.114     High High
cufflinks 1.197        
cufflinks 11.133     High  

0 Strain