Gene : Glyma.08G152000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10024:SF256 - C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN Genomic Order:  1520
Name:  ? Glyma.08G152000 Secondary Identifier:  ? PAC:30538306
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G152000 0.5kb upstream 0.5kb upstream 2936 true Chr08: 11670654-11673589 Glycine max
Glyma.08G152000 0.5kb upstream 0.5kb upstream 500 false Chr08: 11673090-11673589 Glycine max
Glyma.08G152000 0.5kb downstream 0.5kb downstream 2936 true Chr08: 11670154-11673089 Glycine max
Glyma.08G152000 0.5kb downstream 0.5kb downstream 500 false Chr08: 11670154-11670653 Glycine max
Glyma.08G152000 1.0kb upstream 1.0kb upstream 3436 true Chr08: 11670654-11674089 Glycine max
Glyma.08G152000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 11673090-11674089 Glycine max
Glyma.08G152000 1.0kb downstream 1.0kb downstream 3436 true Chr08: 11669654-11673089 Glycine max
Glyma.08G152000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 11669654-11670653 Glycine max
Glyma.08G152000 2.0kb upstream 2.0kb upstream 4436 true Chr08: 11670654-11675089 Glycine max
Glyma.08G152000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 11673090-11675089 Glycine max
Glyma.08G152000 2.0kb downstream 2.0kb downstream 4436 true Chr08: 11668654-11673089 Glycine max
Glyma.08G152000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 11668654-11670653 Glycine max
Glyma.08G152000 5.0kb upstream 5.0kb upstream 7436 true Chr08: 11670654-11678089 Glycine max
Glyma.08G152000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 11673090-11678089 Glycine max
Glyma.08G152000 5.0kb downstream 5.0kb downstream 7436 true Chr08: 11665654-11673089 Glycine max
Glyma.08G152000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 11665654-11670653 Glycine max
Glyma.08G152000 10.0kb upstream 10.0kb upstream 12436 true Chr08: 11670654-11683089 Glycine max
Glyma.08G152000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 11673090-11683089 Glycine max
Glyma.08G152000 10.0kb downstream 10.0kb downstream 12436 true Chr08: 11660654-11673089 Glycine max
Glyma.08G152000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 11660654-11670653 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311480 5265 Fabidae View MSA
124069332 5270 Rosid View MSA
123741936 5271 Pentapetalae View MSA
122796289 5272 Eudicot View MSA
122048920 5273 Angiosperm View MSA
121350979 5274 Embryophyte View MSA
123427289 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0689288 0.0 0.271916 Low Low
cufflinks 0.142877 0.0 0.547558 Low  
cufflinks 0.0615727 0.0 0.243659 Low Low
cufflinks 0.132039 0.0 0.507313 Low  
cufflinks 0.431684 0.0 1.566   High
cufflinks 0.142427 0.0 0.545608 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0891269 0.0 0.348001 Low  
cufflinks 0.384926 0.0 1.40633   High
cufflinks 0.474        
cufflinks 0.375        
cufflinks 0.193       Low
cufflinks 1.674       High
cufflinks 0.791       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.575        
cufflinks 0.194       Low
cufflinks 0.719        
cufflinks 0.224       Low
cufflinks 0.504        
cufflinks 0.349        
cufflinks 0.435        
cufflinks 0.291        
cufflinks 0.232       Low
cufflinks 0.392        
cufflinks 0.42        

0 Strain