Gene : Glyma.08G152400 G. max Wm82.a2.v1
Defline:  (1 of 2) PF05303 - Protein of unknown function (DUF727) (DUF727) Genomic Order:  1524
Name:  ? Glyma.08G152400 Secondary Identifier:  ? PAC:30536114
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G152400 0.5kb upstream 0.5kb upstream 16483 true Chr08: 11707177-11723659 Glycine max
Glyma.08G152400 0.5kb upstream 0.5kb upstream 500 false Chr08: 11707177-11707676 Glycine max
Glyma.08G152400 0.5kb downstream 0.5kb downstream 16483 true Chr08: 11707677-11724159 Glycine max
Glyma.08G152400 0.5kb downstream 0.5kb downstream 500 false Chr08: 11723660-11724159 Glycine max
Glyma.08G152400 1.0kb upstream 1.0kb upstream 16983 true Chr08: 11706677-11723659 Glycine max
Glyma.08G152400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 11706677-11707676 Glycine max
Glyma.08G152400 1.0kb downstream 1.0kb downstream 16983 true Chr08: 11707677-11724659 Glycine max
Glyma.08G152400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 11723660-11724659 Glycine max
Glyma.08G152400 2.0kb upstream 2.0kb upstream 17983 true Chr08: 11705677-11723659 Glycine max
Glyma.08G152400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 11705677-11707676 Glycine max
Glyma.08G152400 2.0kb downstream 2.0kb downstream 17983 true Chr08: 11707677-11725659 Glycine max
Glyma.08G152400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 11723660-11725659 Glycine max
Glyma.08G152400 5.0kb upstream 5.0kb upstream 20983 true Chr08: 11702677-11723659 Glycine max
Glyma.08G152400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 11702677-11707676 Glycine max
Glyma.08G152400 5.0kb downstream 5.0kb downstream 20983 true Chr08: 11707677-11728659 Glycine max
Glyma.08G152400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 11723660-11728659 Glycine max
Glyma.08G152400 10.0kb upstream 10.0kb upstream 25983 true Chr08: 11697677-11723659 Glycine max
Glyma.08G152400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 11697677-11707676 Glycine max
Glyma.08G152400 10.0kb downstream 10.0kb downstream 25983 true Chr08: 11707677-11733659 Glycine max
Glyma.08G152400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 11723660-11733659 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307216 5265 Fabidae View MSA
124065993 5270 Rosid View MSA
123739078 5271 Pentapetalae View MSA
122787261 5272 Eudicot View MSA
122046503 5273 Angiosperm View MSA
121349433 5274 Embryophyte View MSA
123381307 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.594 0.0 53.4843   High
cufflinks 9.76005 0.0 26.4298    
cufflinks 8.03644 0.0 21.5917    
cufflinks 10.8084 0.0 29.4822    
cufflinks 15.5342 0.0 43.7189   High
cufflinks 6.58777 0.0 17.5937   Low
cufflinks 12.3468 0.0 33.9558    
cufflinks 8.0728 0.0 21.6785    
cufflinks 12.1543 0.0 33.4339    
cufflinks 3.348        
cufflinks 2.018       Low
cufflinks 4.398        
cufflinks 7.058       High
cufflinks 9.014     High High
cufflinks 3.684        
cufflinks 3.753        
cufflinks 3.3        
cufflinks 4.647        
cufflinks 4.947        
cufflinks 3.818        
cufflinks 2.35       Low
cufflinks 3.788        
cufflinks 4.499        
cufflinks 1.941       Low
cufflinks 3.95        
cufflinks 3.682        

0 Strain