Gene : Glyma.08G153100 G. max Wm82.a2.v1
Defline:  (1 of 2) KOG3702 - Nuclear polyadenylated RNA binding protein Genomic Order:  1531
Name:  ? Glyma.08G153100 Secondary Identifier:  ? PAC:30539675
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G153100 0.5kb upstream 0.5kb upstream 8091 true Chr08: 11791484-11799574 Glycine max
Glyma.08G153100 0.5kb upstream 0.5kb upstream 500 false Chr08: 11799075-11799574 Glycine max
Glyma.08G153100 0.5kb downstream 0.5kb downstream 8091 true Chr08: 11790984-11799074 Glycine max
Glyma.08G153100 0.5kb downstream 0.5kb downstream 500 false Chr08: 11790984-11791483 Glycine max
Glyma.08G153100 1.0kb upstream 1.0kb upstream 8591 true Chr08: 11791484-11800074 Glycine max
Glyma.08G153100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 11799075-11800074 Glycine max
Glyma.08G153100 1.0kb downstream 1.0kb downstream 8591 true Chr08: 11790484-11799074 Glycine max
Glyma.08G153100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 11790484-11791483 Glycine max
Glyma.08G153100 2.0kb upstream 2.0kb upstream 9591 true Chr08: 11791484-11801074 Glycine max
Glyma.08G153100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 11799075-11801074 Glycine max
Glyma.08G153100 2.0kb downstream 2.0kb downstream 9591 true Chr08: 11789484-11799074 Glycine max
Glyma.08G153100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 11789484-11791483 Glycine max
Glyma.08G153100 5.0kb upstream 5.0kb upstream 12591 true Chr08: 11791484-11804074 Glycine max
Glyma.08G153100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 11799075-11804074 Glycine max
Glyma.08G153100 5.0kb downstream 5.0kb downstream 12591 true Chr08: 11786484-11799074 Glycine max
Glyma.08G153100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 11786484-11791483 Glycine max
Glyma.08G153100 10.0kb upstream 10.0kb upstream 17591 true Chr08: 11791484-11809074 Glycine max
Glyma.08G153100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 11799075-11809074 Glycine max
Glyma.08G153100 10.0kb downstream 10.0kb downstream 17591 true Chr08: 11781484-11799074 Glycine max
Glyma.08G153100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 11781484-11791483 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302784 5265 Fabidae View MSA
124060657 5270 Rosid View MSA
123744402 5271 Pentapetalae View MSA
122787071 5272 Eudicot View MSA
122046161 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121345767 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.02934 0.0 20.0383    
cufflinks 5.81294 0.0 22.8939    
cufflinks 5.27178 0.0 18.6966    
cufflinks 6.35683 0.0 22.1036   High
cufflinks 5.02563 0.0 20.2136    
cufflinks 4.07189 0.0 13.1449   Low
cufflinks 6.48187 0.0 22.5487   High
cufflinks 5.91485 0.0 23.1295    
cufflinks 5.06158 0.0 18.1326    
cufflinks 0.848        
cufflinks 0.562       Low
cufflinks 0.899        
cufflinks 0.753        
cufflinks 0.842        
cufflinks 0.98       High
cufflinks 0.891        
cufflinks 0.775        
cufflinks 0.95        
cufflinks 1.027       High
cufflinks 0.895        
cufflinks 0.765        
cufflinks 0.916        
cufflinks 1.016       High
cufflinks 0.689       Low
cufflinks 0.85        
cufflinks 0.672       Low

0 Strain