Gene : Glyma.08G193200 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11649:SF62 - PROTEIN SEY1 HOMOLOG Genomic Order:  1932
Name:  ? Glyma.08G193200 Secondary Identifier:  ? PAC:30540920
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G193200 0.5kb upstream 0.5kb upstream 9335 true Chr08: 15546547-15555881 Glycine max
Glyma.08G193200 0.5kb upstream 0.5kb upstream 500 false Chr08: 15555382-15555881 Glycine max
Glyma.08G193200 0.5kb downstream 0.5kb downstream 9335 true Chr08: 15546047-15555381 Glycine max
Glyma.08G193200 0.5kb downstream 0.5kb downstream 500 false Chr08: 15546047-15546546 Glycine max
Glyma.08G193200 1.0kb upstream 1.0kb upstream 9835 true Chr08: 15546547-15556381 Glycine max
Glyma.08G193200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 15555382-15556381 Glycine max
Glyma.08G193200 1.0kb downstream 1.0kb downstream 9835 true Chr08: 15545547-15555381 Glycine max
Glyma.08G193200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 15545547-15546546 Glycine max
Glyma.08G193200 2.0kb upstream 2.0kb upstream 10835 true Chr08: 15546547-15557381 Glycine max
Glyma.08G193200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 15555382-15557381 Glycine max
Glyma.08G193200 2.0kb downstream 2.0kb downstream 10835 true Chr08: 15544547-15555381 Glycine max
Glyma.08G193200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 15544547-15546546 Glycine max
Glyma.08G193200 5.0kb upstream 5.0kb upstream 13835 true Chr08: 15546547-15560381 Glycine max
Glyma.08G193200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 15555382-15560381 Glycine max
Glyma.08G193200 5.0kb downstream 5.0kb downstream 13835 true Chr08: 15541547-15555381 Glycine max
Glyma.08G193200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 15541547-15546546 Glycine max
Glyma.08G193200 10.0kb upstream 10.0kb upstream 18835 true Chr08: 15546547-15565381 Glycine max
Glyma.08G193200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 15555382-15565381 Glycine max
Glyma.08G193200 10.0kb downstream 10.0kb downstream 18835 true Chr08: 15536547-15555381 Glycine max
Glyma.08G193200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 15536547-15546546 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308651 5265 Fabidae View MSA
124066568 5270 Rosid View MSA
123749417 5271 Pentapetalae View MSA
122789407 5272 Eudicot View MSA
122048345 5273 Angiosperm View MSA
121345089 5274 Embryophyte View MSA
123427050 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.55721 0.0 20.2748    
cufflinks 8.90679 0.0 23.7949    
cufflinks 6.02828 0.0 16.3013   Low
cufflinks 11.5955 0.0 30.9573    
cufflinks 17.3497 0.0 46.873   High
cufflinks 17.7217 0.0 47.9748   High
cufflinks 9.81495 0.0 26.1922    
cufflinks 17.9296 0.0 48.5956   High
cufflinks 7.81377 0.0 20.9401    
cufflinks 7.429       High
cufflinks 4.095        
cufflinks 3.531        
cufflinks 7.615     High High
cufflinks 9.169     High High
cufflinks 5.259     High  
cufflinks 3.011        
cufflinks 3.444        
cufflinks 4.866        
cufflinks 4.279        
cufflinks 2.255       Low
cufflinks 4.434        
cufflinks 2.815        
cufflinks 2.67       Low
cufflinks 5.204        
cufflinks 2.337       Low
cufflinks 5.228        

0 Strain