Gene : Glyma.08G193900 G. max Wm82.a2.v1
Defline:  (1 of 8) 1.14.13.112 - 3-epi-6-deoxocathasterone 23-monooxygenase / CYP90D1 Genomic Order:  1939
Name:  ? Glyma.08G193900 Secondary Identifier:  ? PAC:30538651
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G193900 0.5kb upstream 0.5kb upstream 5446 true Chr08: 15620227-15625672 Glycine max
Glyma.08G193900 0.5kb upstream 0.5kb upstream 500 false Chr08: 15620227-15620726 Glycine max
Glyma.08G193900 0.5kb downstream 0.5kb downstream 5446 true Chr08: 15620727-15626172 Glycine max
Glyma.08G193900 0.5kb downstream 0.5kb downstream 500 false Chr08: 15625673-15626172 Glycine max
Glyma.08G193900 1.0kb upstream 1.0kb upstream 5946 true Chr08: 15619727-15625672 Glycine max
Glyma.08G193900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 15619727-15620726 Glycine max
Glyma.08G193900 1.0kb downstream 1.0kb downstream 5946 true Chr08: 15620727-15626672 Glycine max
Glyma.08G193900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 15625673-15626672 Glycine max
Glyma.08G193900 2.0kb upstream 2.0kb upstream 6946 true Chr08: 15618727-15625672 Glycine max
Glyma.08G193900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 15618727-15620726 Glycine max
Glyma.08G193900 2.0kb downstream 2.0kb downstream 6946 true Chr08: 15620727-15627672 Glycine max
Glyma.08G193900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 15625673-15627672 Glycine max
Glyma.08G193900 5.0kb upstream 5.0kb upstream 9946 true Chr08: 15615727-15625672 Glycine max
Glyma.08G193900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 15615727-15620726 Glycine max
Glyma.08G193900 5.0kb downstream 5.0kb downstream 9946 true Chr08: 15620727-15630672 Glycine max
Glyma.08G193900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 15625673-15630672 Glycine max
Glyma.08G193900 10.0kb upstream 10.0kb upstream 14946 true Chr08: 15610727-15625672 Glycine max
Glyma.08G193900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 15610727-15620726 Glycine max
Glyma.08G193900 10.0kb downstream 10.0kb downstream 14946 true Chr08: 15620727-15635672 Glycine max
Glyma.08G193900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 15625673-15635672 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305510 5265 Fabidae View MSA
124064486 5270 Rosid View MSA
123737325 5271 Pentapetalae View MSA
122792447 5272 Eudicot View MSA
122043858 5273 Angiosperm View MSA
123429088 5275 Viridiplantae View MSA
121351760 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.146401 0.0 0.716038 Low Low
cufflinks 0.428868 0.0 2.00967   Low
cufflinks 16.5427 0.0 56.9153   High
cufflinks 2.43418 0.0 10.1571    
cufflinks 5.9103 0.0 19.5413    
cufflinks 3.3746 0.0 12.8466    
cufflinks 8.81115 0.0 27.2589    
cufflinks 0.604554 0.0 2.66689    
cufflinks 9.59375 0.0 33.6613    
cufflinks 0.11        
cufflinks 5.063       High
cufflinks 1.962        
cufflinks 2.769        
cufflinks 3.781        
cufflinks 0.971        
cufflinks 0.072     Low Low
cufflinks 4.882        
cufflinks 0.652        
cufflinks 0.083     Low Low
cufflinks 0.072     Low Low
cufflinks 5.639       High
cufflinks 0.095       Low
cufflinks 0.13        
cufflinks 4.98       High
cufflinks 0.066     Low Low
cufflinks 10.422     High High

0 Strain