Gene : Glyma.08G194000 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR23056:SF26 - CALCINEURIN B-LIKE PROTEIN 10 Genomic Order:  1940
Name:  ? Glyma.08G194000 Secondary Identifier:  ? PAC:30540865
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G194000 0.5kb upstream 0.5kb upstream 3946 true Chr08: 15628396-15632341 Glycine max
Glyma.08G194000 0.5kb upstream 0.5kb upstream 500 false Chr08: 15631842-15632341 Glycine max
Glyma.08G194000 0.5kb downstream 0.5kb downstream 3946 true Chr08: 15627896-15631841 Glycine max
Glyma.08G194000 0.5kb downstream 0.5kb downstream 500 false Chr08: 15627896-15628395 Glycine max
Glyma.08G194000 1.0kb upstream 1.0kb upstream 4446 true Chr08: 15628396-15632841 Glycine max
Glyma.08G194000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 15631842-15632841 Glycine max
Glyma.08G194000 1.0kb downstream 1.0kb downstream 4446 true Chr08: 15627396-15631841 Glycine max
Glyma.08G194000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 15627396-15628395 Glycine max
Glyma.08G194000 2.0kb upstream 2.0kb upstream 5446 true Chr08: 15628396-15633841 Glycine max
Glyma.08G194000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 15631842-15633841 Glycine max
Glyma.08G194000 2.0kb downstream 2.0kb downstream 5446 true Chr08: 15626396-15631841 Glycine max
Glyma.08G194000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 15626396-15628395 Glycine max
Glyma.08G194000 5.0kb upstream 5.0kb upstream 8446 true Chr08: 15628396-15636841 Glycine max
Glyma.08G194000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 15631842-15636841 Glycine max
Glyma.08G194000 5.0kb downstream 5.0kb downstream 8446 true Chr08: 15623396-15631841 Glycine max
Glyma.08G194000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 15623396-15628395 Glycine max
Glyma.08G194000 10.0kb upstream 10.0kb upstream 13446 true Chr08: 15628396-15641841 Glycine max
Glyma.08G194000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 15631842-15641841 Glycine max
Glyma.08G194000 10.0kb downstream 10.0kb downstream 13446 true Chr08: 15618396-15631841 Glycine max
Glyma.08G194000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 15618396-15628395 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306823 5265 Fabidae View MSA
124070592 5270 Rosid View MSA
123751090 5271 Pentapetalae View MSA
122794706 5272 Eudicot View MSA
122051437 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350709 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.923717 0.0 4.25096   Low
cufflinks 5.2964 0.0 21.6232    
cufflinks 12.4606 0.0 45.7996   High
cufflinks 3.22298 0.0 16.013    
cufflinks 8.57944 0.0 29.5138    
cufflinks 7.63871 0.0 31.5862    
cufflinks 4.05231 0.0 13.358    
cufflinks 4.16297 0.0 18.0885    
cufflinks 13.5159 0.0 48.7258   High
cufflinks 1.432        
cufflinks 1.415        
cufflinks 1.943        
cufflinks 2.168       High
cufflinks 3.204       High
cufflinks 1.7        
cufflinks 0.811        
cufflinks 0.355       Low
cufflinks 1.74        
cufflinks 0.997        
cufflinks 0.577       Low
cufflinks 0.847        
cufflinks 0.573       Low
cufflinks 0.676        
cufflinks 1.73        
cufflinks 0.645        
cufflinks 0.831        

0 Strain