Gene : Glyma.08G194400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21206 - SLD5 PROTEIN Genomic Order:  1944
Name:  ? Glyma.08G194400 Secondary Identifier:  ? PAC:30537863
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G194400 0.5kb upstream 0.5kb upstream 4102 true Chr08: 15652060-15656161 Glycine max
Glyma.08G194400 0.5kb upstream 0.5kb upstream 500 false Chr08: 15655662-15656161 Glycine max
Glyma.08G194400 0.5kb downstream 0.5kb downstream 4102 true Chr08: 15651560-15655661 Glycine max
Glyma.08G194400 0.5kb downstream 0.5kb downstream 500 false Chr08: 15651560-15652059 Glycine max
Glyma.08G194400 1.0kb upstream 1.0kb upstream 4602 true Chr08: 15652060-15656661 Glycine max
Glyma.08G194400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 15655662-15656661 Glycine max
Glyma.08G194400 1.0kb downstream 1.0kb downstream 4602 true Chr08: 15651060-15655661 Glycine max
Glyma.08G194400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 15651060-15652059 Glycine max
Glyma.08G194400 2.0kb upstream 2.0kb upstream 5602 true Chr08: 15652060-15657661 Glycine max
Glyma.08G194400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 15655662-15657661 Glycine max
Glyma.08G194400 2.0kb downstream 2.0kb downstream 5602 true Chr08: 15650060-15655661 Glycine max
Glyma.08G194400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 15650060-15652059 Glycine max
Glyma.08G194400 5.0kb upstream 5.0kb upstream 8602 true Chr08: 15652060-15660661 Glycine max
Glyma.08G194400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 15655662-15660661 Glycine max
Glyma.08G194400 5.0kb downstream 5.0kb downstream 8602 true Chr08: 15647060-15655661 Glycine max
Glyma.08G194400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 15647060-15652059 Glycine max
Glyma.08G194400 10.0kb upstream 10.0kb upstream 13602 true Chr08: 15652060-15665661 Glycine max
Glyma.08G194400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 15655662-15665661 Glycine max
Glyma.08G194400 10.0kb downstream 10.0kb downstream 13602 true Chr08: 15642060-15655661 Glycine max
Glyma.08G194400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 15642060-15652059 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299126 5265 Fabidae View MSA
124063241 5270 Rosid View MSA
123739150 5271 Pentapetalae View MSA
122785984 5272 Eudicot View MSA
122043096 5273 Angiosperm View MSA
121344568 5274 Embryophyte View MSA
123424652 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.86849 0.0 12.3039    
cufflinks 7.98994 0.0 22.9914    
cufflinks 2.96928 0.0 9.77889   Low
cufflinks 3.32906 0.0 10.7883    
cufflinks 7.60378 0.0 22.0117    
cufflinks 6.79261 0.0 19.9646    
cufflinks 2.57318 0.0 8.67012   Low
cufflinks 6.17598 0.0 18.3472    
cufflinks 12.652 0.0 34.7637   High
cufflinks 1.418        
cufflinks 0.844        
cufflinks 1.05        
cufflinks 3.006        
cufflinks 3.258        
cufflinks 22.296     High High
cufflinks 1.995        
cufflinks 0.899        
cufflinks 0.964        
cufflinks 2.794        
cufflinks 1.319        
cufflinks 1.025        
cufflinks 1.56        
cufflinks 2.716        
cufflinks 1.001        
cufflinks 1.62        
cufflinks 1.016        

0 Strain