Gene : Glyma.08G195300 G. max Wm82.a2.v1
Defline:  (1 of 79) PF02701 - Dof domain, zinc finger (zf-Dof) Genomic Order:  1953
Name:  ? Glyma.08G195300 Secondary Identifier:  ? PAC:30540387
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G195300 0.5kb upstream 0.5kb upstream 2567 true Chr08: 15745850-15748416 Glycine max
Glyma.08G195300 0.5kb upstream 0.5kb upstream 500 false Chr08: 15745850-15746349 Glycine max
Glyma.08G195300 0.5kb downstream 0.5kb downstream 2567 true Chr08: 15746350-15748916 Glycine max
Glyma.08G195300 0.5kb downstream 0.5kb downstream 500 false Chr08: 15748417-15748916 Glycine max
Glyma.08G195300 1.0kb upstream 1.0kb upstream 3067 true Chr08: 15745350-15748416 Glycine max
Glyma.08G195300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 15745350-15746349 Glycine max
Glyma.08G195300 1.0kb downstream 1.0kb downstream 3067 true Chr08: 15746350-15749416 Glycine max
Glyma.08G195300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 15748417-15749416 Glycine max
Glyma.08G195300 2.0kb upstream 2.0kb upstream 4067 true Chr08: 15744350-15748416 Glycine max
Glyma.08G195300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 15744350-15746349 Glycine max
Glyma.08G195300 2.0kb downstream 2.0kb downstream 4067 true Chr08: 15746350-15750416 Glycine max
Glyma.08G195300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 15748417-15750416 Glycine max
Glyma.08G195300 5.0kb upstream 5.0kb upstream 7067 true Chr08: 15741350-15748416 Glycine max
Glyma.08G195300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 15741350-15746349 Glycine max
Glyma.08G195300 5.0kb downstream 5.0kb downstream 7067 true Chr08: 15746350-15753416 Glycine max
Glyma.08G195300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 15748417-15753416 Glycine max
Glyma.08G195300 10.0kb upstream 10.0kb upstream 12067 true Chr08: 15736350-15748416 Glycine max
Glyma.08G195300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 15736350-15746349 Glycine max
Glyma.08G195300 10.0kb downstream 10.0kb downstream 12067 true Chr08: 15746350-15758416 Glycine max
Glyma.08G195300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 15748417-15758416 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305419 5265 Fabidae View MSA
124067626 5270 Rosid View MSA
123747887 5271 Pentapetalae View MSA
122788322 5272 Eudicot View MSA
122050733 5273 Angiosperm View MSA
121349903 5274 Embryophyte View MSA
123427226 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.76205 0.0 5.84131    
cufflinks 2.52728 0.0 7.95635    
cufflinks 3.91902 0.0 11.5762   High
cufflinks 1.45054 0.0 4.90881    
cufflinks 1.80477 0.0 5.9675    
cufflinks 0.914559 0.0 3.23816   Low
cufflinks 0.964568 0.0 3.39957   Low
cufflinks 3.91254 0.0 11.5506   High
cufflinks 1.30905 0.0 4.48534    
cufflinks 6.364       High
cufflinks 3.157        
cufflinks 3.591        
cufflinks 1.772        
cufflinks 0.399       Low
cufflinks 5.787     High High
cufflinks 4.084        
cufflinks 0.916       Low
cufflinks 2.077        
cufflinks 3.576        
cufflinks 4.272        
cufflinks 3.678        
cufflinks 4.372        
cufflinks 3.097        
cufflinks 3.072        
cufflinks 4.279        
cufflinks 2.908        

0 Strain