Gene : Glyma.08G196500 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR10544 - 60S RIBOSOMAL PROTEIN L28 Genomic Order:  1965
Name:  ? Glyma.08G196500 Secondary Identifier:  ? PAC:30537245
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G196500 0.5kb upstream 0.5kb upstream 2672 true Chr08: 15848231-15850902 Glycine max
Glyma.08G196500 0.5kb upstream 0.5kb upstream 500 false Chr08: 15848231-15848730 Glycine max
Glyma.08G196500 0.5kb downstream 0.5kb downstream 2672 true Chr08: 15848731-15851402 Glycine max
Glyma.08G196500 0.5kb downstream 0.5kb downstream 500 false Chr08: 15850903-15851402 Glycine max
Glyma.08G196500 1.0kb upstream 1.0kb upstream 3172 true Chr08: 15847731-15850902 Glycine max
Glyma.08G196500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 15847731-15848730 Glycine max
Glyma.08G196500 1.0kb downstream 1.0kb downstream 3172 true Chr08: 15848731-15851902 Glycine max
Glyma.08G196500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 15850903-15851902 Glycine max
Glyma.08G196500 2.0kb upstream 2.0kb upstream 4172 true Chr08: 15846731-15850902 Glycine max
Glyma.08G196500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 15846731-15848730 Glycine max
Glyma.08G196500 2.0kb downstream 2.0kb downstream 4172 true Chr08: 15848731-15852902 Glycine max
Glyma.08G196500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 15850903-15852902 Glycine max
Glyma.08G196500 5.0kb upstream 5.0kb upstream 7172 true Chr08: 15843731-15850902 Glycine max
Glyma.08G196500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 15843731-15848730 Glycine max
Glyma.08G196500 5.0kb downstream 5.0kb downstream 7172 true Chr08: 15848731-15855902 Glycine max
Glyma.08G196500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 15850903-15855902 Glycine max
Glyma.08G196500 10.0kb upstream 10.0kb upstream 12172 true Chr08: 15838731-15850902 Glycine max
Glyma.08G196500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 15838731-15848730 Glycine max
Glyma.08G196500 10.0kb downstream 10.0kb downstream 12172 true Chr08: 15848731-15860902 Glycine max
Glyma.08G196500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 15850903-15860902 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314116 5265 Fabidae View MSA
124072895 5270 Rosid View MSA
123746197 5271 Pentapetalae View MSA
122786933 5272 Eudicot View MSA
122049250 5273 Angiosperm View MSA
121348923 5274 Embryophyte View MSA
123424789 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 95.4261 0.0 272.171 High  
cufflinks 109.498 0.0 318.189 High  
cufflinks 41.9454 0.0 112.374 High Low
cufflinks 64.4179 0.0 176.81 High Low
cufflinks 215.789 0.0 704.626 High High
cufflinks 211.112 0.0 684.302 High High
cufflinks 150.272 0.0 458.489 High  
cufflinks 95.5769 0.0 274.073 High  
cufflinks 134.202 0.0 402.287 High  
cufflinks 46.622     High  
cufflinks 11.866     High Low
cufflinks 33.53     High  
cufflinks 157.031     High High
cufflinks 244.907     High High
cufflinks 9.169     High Low
cufflinks 43.947     High  
cufflinks 31.312     High  
cufflinks 36.178     High  
cufflinks 58.329     High  
cufflinks 28.209     High  
cufflinks 22.731     High  
cufflinks 31.769     High  
cufflinks 50.964     High  
cufflinks 16.609     High  
cufflinks 37.287     High  
cufflinks 31.127     High  

0 Strain