Gene : Glyma.08G197400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31042:SF24 - CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN Genomic Order:  1974
Name:  ? Glyma.08G197400 Secondary Identifier:  ? PAC:30536135
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G197400 0.5kb upstream 0.5kb upstream 4079 true Chr08: 15919543-15923621 Glycine max
Glyma.08G197400 0.5kb upstream 0.5kb upstream 500 false Chr08: 15923122-15923621 Glycine max
Glyma.08G197400 0.5kb downstream 0.5kb downstream 4079 true Chr08: 15919043-15923121 Glycine max
Glyma.08G197400 0.5kb downstream 0.5kb downstream 500 false Chr08: 15919043-15919542 Glycine max
Glyma.08G197400 1.0kb upstream 1.0kb upstream 4579 true Chr08: 15919543-15924121 Glycine max
Glyma.08G197400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 15923122-15924121 Glycine max
Glyma.08G197400 1.0kb downstream 1.0kb downstream 4579 true Chr08: 15918543-15923121 Glycine max
Glyma.08G197400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 15918543-15919542 Glycine max
Glyma.08G197400 2.0kb upstream 2.0kb upstream 5579 true Chr08: 15919543-15925121 Glycine max
Glyma.08G197400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 15923122-15925121 Glycine max
Glyma.08G197400 2.0kb downstream 2.0kb downstream 5579 true Chr08: 15917543-15923121 Glycine max
Glyma.08G197400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 15917543-15919542 Glycine max
Glyma.08G197400 5.0kb upstream 5.0kb upstream 8579 true Chr08: 15919543-15928121 Glycine max
Glyma.08G197400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 15923122-15928121 Glycine max
Glyma.08G197400 5.0kb downstream 5.0kb downstream 8579 true Chr08: 15914543-15923121 Glycine max
Glyma.08G197400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 15914543-15919542 Glycine max
Glyma.08G197400 10.0kb upstream 10.0kb upstream 13579 true Chr08: 15919543-15933121 Glycine max
Glyma.08G197400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 15923122-15933121 Glycine max
Glyma.08G197400 10.0kb downstream 10.0kb downstream 13579 true Chr08: 15909543-15923121 Glycine max
Glyma.08G197400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 15909543-15919542 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041085 5273 Angiosperm View MSA
122307574 5265 Fabidae View MSA
124070934 5270 Rosid View MSA
123745027 5271 Pentapetalae View MSA
122787278 5272 Eudicot View MSA
121351490 5274 Embryophyte View MSA
123428085 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.992898 0.0 5.64934    
cufflinks 1.62 0.0 6.91954    
cufflinks 0.697297 0.0 2.8016   Low
cufflinks 1.8564 0.0 6.4641    
cufflinks 1.33753 0.0 4.93285    
cufflinks 1.62926 0.0 5.66246    
cufflinks 1.8822 0.0 6.76378    
cufflinks 3.24089 0.0 9.96468   High
cufflinks 1.34077 0.0 4.80469    
cufflinks 1.071        
cufflinks 0.054       Low
cufflinks 0.695        
cufflinks 0.833        
cufflinks 1.334       High
cufflinks 0.015     Low Low
cufflinks 0.243        
cufflinks 0.226        
cufflinks 1.809       High
cufflinks 1.035        
cufflinks 0.359        
cufflinks 0.115        
cufflinks 0.421        
cufflinks 0.749        
cufflinks 0.064       Low
cufflinks 0.284        
cufflinks 0.118        

0 Strain