Gene : Glyma.08G199200 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR13104 - MED-6-RELATED Genomic Order:  1992
Name:  ? Glyma.08G199200 Secondary Identifier:  ? PAC:30539925
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G199200 0.5kb upstream 0.5kb upstream 4991 true Chr08: 16085418-16090408 Glycine max
Glyma.08G199200 0.5kb upstream 0.5kb upstream 500 false Chr08: 16085418-16085917 Glycine max
Glyma.08G199200 0.5kb downstream 0.5kb downstream 4991 true Chr08: 16085918-16090908 Glycine max
Glyma.08G199200 0.5kb downstream 0.5kb downstream 500 false Chr08: 16090409-16090908 Glycine max
Glyma.08G199200 1.0kb upstream 1.0kb upstream 5491 true Chr08: 16084918-16090408 Glycine max
Glyma.08G199200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 16084918-16085917 Glycine max
Glyma.08G199200 1.0kb downstream 1.0kb downstream 5491 true Chr08: 16085918-16091408 Glycine max
Glyma.08G199200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 16090409-16091408 Glycine max
Glyma.08G199200 2.0kb upstream 2.0kb upstream 6491 true Chr08: 16083918-16090408 Glycine max
Glyma.08G199200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 16083918-16085917 Glycine max
Glyma.08G199200 2.0kb downstream 2.0kb downstream 6491 true Chr08: 16085918-16092408 Glycine max
Glyma.08G199200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 16090409-16092408 Glycine max
Glyma.08G199200 5.0kb upstream 5.0kb upstream 9491 true Chr08: 16080918-16090408 Glycine max
Glyma.08G199200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 16080918-16085917 Glycine max
Glyma.08G199200 5.0kb downstream 5.0kb downstream 9491 true Chr08: 16085918-16095408 Glycine max
Glyma.08G199200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 16090409-16095408 Glycine max
Glyma.08G199200 10.0kb upstream 10.0kb upstream 14491 true Chr08: 16075918-16090408 Glycine max
Glyma.08G199200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 16075918-16085917 Glycine max
Glyma.08G199200 10.0kb downstream 10.0kb downstream 14491 true Chr08: 16085918-16100408 Glycine max
Glyma.08G199200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 16090409-16100408 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299825 5265 Fabidae View MSA
124065593 5270 Rosid View MSA
123740699 5271 Pentapetalae View MSA
122793501 5272 Eudicot View MSA
122048865 5273 Angiosperm View MSA
121348373 5274 Embryophyte View MSA
123425020 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.5635 0.0 47.7422   High
cufflinks 12.0865 0.0 43.1903    
cufflinks 10.1984 0.0 37.4245    
cufflinks 8.50169 0.0 32.2787   Low
cufflinks 12.4258 0.0 44.09    
cufflinks 12.5993 0.0 44.5956    
cufflinks 12.0879 0.0 43.2231    
cufflinks 7.63513 0.0 29.8906   Low
cufflinks 11.1744 0.0 40.2898    
cufflinks 1.046       Low
cufflinks 1.205        
cufflinks 1.46        
cufflinks 2.026       High
cufflinks 2.263       High
cufflinks 1.109       Low
cufflinks 1.914        
cufflinks 0.954       Low
cufflinks 1.628        
cufflinks 1.793        
cufflinks 1.897        
cufflinks 1.833        
cufflinks 1.588        
cufflinks 1.628        
cufflinks 1.578        
cufflinks 2.104       High
cufflinks 1.238        

0 Strain