Gene : Glyma.08G187000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10527:SF6 - IMPORTIN-4 Genomic Order:  1870
Name:  ? Glyma.08G187000 Secondary Identifier:  ? PAC:30536064
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G187000 0.5kb upstream 0.5kb upstream 8240 true Chr08: 14976812-14985051 Glycine max
Glyma.08G187000 0.5kb upstream 0.5kb upstream 500 false Chr08: 14976812-14977311 Glycine max
Glyma.08G187000 0.5kb downstream 0.5kb downstream 8240 true Chr08: 14977312-14985551 Glycine max
Glyma.08G187000 0.5kb downstream 0.5kb downstream 500 false Chr08: 14985052-14985551 Glycine max
Glyma.08G187000 1.0kb upstream 1.0kb upstream 8740 true Chr08: 14976312-14985051 Glycine max
Glyma.08G187000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 14976312-14977311 Glycine max
Glyma.08G187000 1.0kb downstream 1.0kb downstream 8740 true Chr08: 14977312-14986051 Glycine max
Glyma.08G187000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 14985052-14986051 Glycine max
Glyma.08G187000 2.0kb upstream 2.0kb upstream 9740 true Chr08: 14975312-14985051 Glycine max
Glyma.08G187000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 14975312-14977311 Glycine max
Glyma.08G187000 2.0kb downstream 2.0kb downstream 9740 true Chr08: 14977312-14987051 Glycine max
Glyma.08G187000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 14985052-14987051 Glycine max
Glyma.08G187000 5.0kb upstream 5.0kb upstream 12740 true Chr08: 14972312-14985051 Glycine max
Glyma.08G187000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 14972312-14977311 Glycine max
Glyma.08G187000 5.0kb downstream 5.0kb downstream 12740 true Chr08: 14977312-14990051 Glycine max
Glyma.08G187000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 14985052-14990051 Glycine max
Glyma.08G187000 10.0kb upstream 10.0kb upstream 17740 true Chr08: 14967312-14985051 Glycine max
Glyma.08G187000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 14967312-14977311 Glycine max
Glyma.08G187000 10.0kb downstream 10.0kb downstream 17740 true Chr08: 14977312-14995051 Glycine max
Glyma.08G187000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 14985052-14995051 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303378 5265 Fabidae View MSA
124072695 5270 Rosid View MSA
123744874 5271 Pentapetalae View MSA
122785605 5272 Eudicot View MSA
122049923 5273 Angiosperm View MSA
123429119 5275 Viridiplantae View MSA
121344058 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.41508 0.0 19.7862    
cufflinks 6.16917 0.0 16.5034    
cufflinks 6.48863 0.0 17.3367    
cufflinks 10.1078 0.0 27.0612   High
cufflinks 9.48088 0.0 25.3432    
cufflinks 3.1716 0.0 8.80135   Low
cufflinks 8.82064 0.0 23.5461    
cufflinks 8.64873 0.0 23.0898    
cufflinks 4.9967 0.0 13.4586    
cufflinks 5.326       High
cufflinks 1.156       Low
cufflinks 4.116        
cufflinks 4.921       High
cufflinks 6.356       High
cufflinks 1.709        
cufflinks 2.524        
cufflinks 4.252        
cufflinks 3.76        
cufflinks 5.422       High
cufflinks 2.377        
cufflinks 1.609       Low
cufflinks 2.592        
cufflinks 3.51        
cufflinks 1.177       Low
cufflinks 2.42        
cufflinks 2.336        

0 Strain