Gene : Glyma.08G188400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10766//PTHR10766:SF52 - TRANSMEMBRANE 9 SUPERFAMILY PROTEIN Genomic Order:  1884
Name:  ? Glyma.08G188400 Secondary Identifier:  ? PAC:30539441
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G188400 0.5kb upstream 0.5kb upstream 6703 true Chr08: 15113466-15120168 Glycine max
Glyma.08G188400 0.5kb upstream 0.5kb upstream 500 false Chr08: 15113466-15113965 Glycine max
Glyma.08G188400 0.5kb downstream 0.5kb downstream 6703 true Chr08: 15113966-15120668 Glycine max
Glyma.08G188400 0.5kb downstream 0.5kb downstream 500 false Chr08: 15120169-15120668 Glycine max
Glyma.08G188400 1.0kb upstream 1.0kb upstream 7203 true Chr08: 15112966-15120168 Glycine max
Glyma.08G188400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 15112966-15113965 Glycine max
Glyma.08G188400 1.0kb downstream 1.0kb downstream 7203 true Chr08: 15113966-15121168 Glycine max
Glyma.08G188400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 15120169-15121168 Glycine max
Glyma.08G188400 2.0kb upstream 2.0kb upstream 8203 true Chr08: 15111966-15120168 Glycine max
Glyma.08G188400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 15111966-15113965 Glycine max
Glyma.08G188400 2.0kb downstream 2.0kb downstream 8203 true Chr08: 15113966-15122168 Glycine max
Glyma.08G188400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 15120169-15122168 Glycine max
Glyma.08G188400 5.0kb upstream 5.0kb upstream 11203 true Chr08: 15108966-15120168 Glycine max
Glyma.08G188400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 15108966-15113965 Glycine max
Glyma.08G188400 5.0kb downstream 5.0kb downstream 11203 true Chr08: 15113966-15125168 Glycine max
Glyma.08G188400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 15120169-15125168 Glycine max
Glyma.08G188400 10.0kb upstream 10.0kb upstream 16203 true Chr08: 15103966-15120168 Glycine max
Glyma.08G188400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 15103966-15113965 Glycine max
Glyma.08G188400 10.0kb downstream 10.0kb downstream 16203 true Chr08: 15113966-15130168 Glycine max
Glyma.08G188400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 15120169-15130168 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311351 5265 Fabidae View MSA
124071508 5270 Rosid View MSA
123743269 5271 Pentapetalae View MSA
122792908 5272 Eudicot View MSA
122045723 5273 Angiosperm View MSA
121344967 5274 Embryophyte View MSA
123423887 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.7348 0.0 100.069 High  
cufflinks 28.2388 0.0 102.509 High  
cufflinks 20.8094 0.0 62.7372 High Low
cufflinks 40.7865 0.0 156.778 High  
cufflinks 40.3364 0.0 153.206 High  
cufflinks 26.8722 0.0 95.2984 High  
cufflinks 36.684 0.0 138.859 High  
cufflinks 42.6811 0.0 165.621 High High
cufflinks 33.0327 0.0 123.013 High  
cufflinks 10.342     High High
cufflinks 6.907     High  
cufflinks 5.618        
cufflinks 9.461     High High
cufflinks 12.443     High High
cufflinks 6.994     High  
cufflinks 5.61        
cufflinks 3.353       Low
cufflinks 7.928     High  
cufflinks 7.692     High  
cufflinks 5.426        
cufflinks 7.381     High  
cufflinks 6.151        
cufflinks 6.712        
cufflinks 7.008     High  
cufflinks 5.359        
cufflinks 5.813        

0 Strain