Gene : Glyma.08G189400 G. max Wm82.a2.v1
Defline:  (1 of 35) 1.13.11.58 - Linoleate 9S-lipoxygenase / Linoleate 9-lipoxygenase Genomic Order:  1894
Name:  ? Glyma.08G189400 Secondary Identifier:  ? PAC:30535980
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5406 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G189400 0.5kb upstream 0.5kb upstream 8935 true Chr08: 15192538-15201472 Glycine max
Glyma.08G189400 0.5kb upstream 0.5kb upstream 500 false Chr08: 15192538-15193037 Glycine max
Glyma.08G189400 0.5kb downstream 0.5kb downstream 8935 true Chr08: 15193038-15201972 Glycine max
Glyma.08G189400 0.5kb downstream 0.5kb downstream 500 false Chr08: 15201473-15201972 Glycine max
Glyma.08G189400 1.0kb upstream 1.0kb upstream 9435 true Chr08: 15192038-15201472 Glycine max
Glyma.08G189400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 15192038-15193037 Glycine max
Glyma.08G189400 1.0kb downstream 1.0kb downstream 9435 true Chr08: 15193038-15202472 Glycine max
Glyma.08G189400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 15201473-15202472 Glycine max
Glyma.08G189400 2.0kb upstream 2.0kb upstream 10435 true Chr08: 15191038-15201472 Glycine max
Glyma.08G189400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 15191038-15193037 Glycine max
Glyma.08G189400 2.0kb downstream 2.0kb downstream 10435 true Chr08: 15193038-15203472 Glycine max
Glyma.08G189400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 15201473-15203472 Glycine max
Glyma.08G189400 5.0kb upstream 5.0kb upstream 13435 true Chr08: 15188038-15201472 Glycine max
Glyma.08G189400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 15188038-15193037 Glycine max
Glyma.08G189400 5.0kb downstream 5.0kb downstream 13435 true Chr08: 15193038-15206472 Glycine max
Glyma.08G189400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 15201473-15206472 Glycine max
Glyma.08G189400 10.0kb upstream 10.0kb upstream 18435 true Chr08: 15183038-15201472 Glycine max
Glyma.08G189400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 15183038-15193037 Glycine max
Glyma.08G189400 10.0kb downstream 10.0kb downstream 18435 true Chr08: 15193038-15211472 Glycine max
Glyma.08G189400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 15201473-15211472 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121783054 5273 Angiosperm View MSA
122316590 5265 Fabidae View MSA
124037112 5270 Rosid View MSA
123754335 5271 Pentapetalae View MSA
122775718 5272 Eudicot View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.57694E-4 0.0 0.0044084 Low  
cufflinks 0.0306139 0.0 0.125735 Low  
cufflinks 0.0197761 0.0 0.0834205 Low  
cufflinks 0.0310535 0.0 0.127394 Low  
cufflinks 0.00127656 0.0 0.00787221 Low  
cufflinks 0.0254868 0.0 0.105838 Low  
cufflinks 1.67691E-5 0.0 7.77283E-4 Low Low
cufflinks 0.0399785 0.0 0.161918 Low  
cufflinks 0.00195948 0.0 0.0104892 Low  
cufflinks 1.084       High
cufflinks 0.517       High
cufflinks 0.017     Low Low
cufflinks 0.042     Low  
cufflinks 0.023     Low  
cufflinks 0.238        
cufflinks 0.022     Low  
cufflinks 0.105        
cufflinks 0.032     Low  
cufflinks 0.042     Low  
cufflinks 0.014     Low Low
cufflinks 0.361        
cufflinks 0.023     Low  
cufflinks 0.052     Low  
cufflinks 0.69       High
cufflinks 0.014     Low Low
cufflinks 0.694       High

0 Strain