Gene : Glyma.08G190000 G. max Wm82.a2.v1
Defline:  (1 of 4) 2.3.1.97 - Glycylpeptide N-tetradecanoyltransferase / Peptide N-tetradecanoyltransferase Genomic Order:  1900
Name:  ? Glyma.08G190000 Secondary Identifier:  ? PAC:30537625
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G190000 0.5kb upstream 0.5kb upstream 4345 true Chr08: 15267879-15272223 Glycine max
Glyma.08G190000 0.5kb upstream 0.5kb upstream 500 false Chr08: 15271724-15272223 Glycine max
Glyma.08G190000 0.5kb downstream 0.5kb downstream 4345 true Chr08: 15267379-15271723 Glycine max
Glyma.08G190000 0.5kb downstream 0.5kb downstream 500 false Chr08: 15267379-15267878 Glycine max
Glyma.08G190000 1.0kb upstream 1.0kb upstream 4845 true Chr08: 15267879-15272723 Glycine max
Glyma.08G190000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 15271724-15272723 Glycine max
Glyma.08G190000 1.0kb downstream 1.0kb downstream 4845 true Chr08: 15266879-15271723 Glycine max
Glyma.08G190000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 15266879-15267878 Glycine max
Glyma.08G190000 2.0kb upstream 2.0kb upstream 5845 true Chr08: 15267879-15273723 Glycine max
Glyma.08G190000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 15271724-15273723 Glycine max
Glyma.08G190000 2.0kb downstream 2.0kb downstream 5845 true Chr08: 15265879-15271723 Glycine max
Glyma.08G190000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 15265879-15267878 Glycine max
Glyma.08G190000 5.0kb upstream 5.0kb upstream 8845 true Chr08: 15267879-15276723 Glycine max
Glyma.08G190000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 15271724-15276723 Glycine max
Glyma.08G190000 5.0kb downstream 5.0kb downstream 8845 true Chr08: 15262879-15271723 Glycine max
Glyma.08G190000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 15262879-15267878 Glycine max
Glyma.08G190000 10.0kb upstream 10.0kb upstream 13845 true Chr08: 15267879-15281723 Glycine max
Glyma.08G190000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 15271724-15281723 Glycine max
Glyma.08G190000 10.0kb downstream 10.0kb downstream 13845 true Chr08: 15257879-15271723 Glycine max
Glyma.08G190000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 15257879-15267878 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314947 5265 Fabidae View MSA
124069969 5270 Rosid View MSA
123739773 5271 Pentapetalae View MSA
122793143 5272 Eudicot View MSA
122050968 5273 Angiosperm View MSA
121343950 5274 Embryophyte View MSA
123423932 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.29571 0.0 30.097    
cufflinks 8.38986 0.0 26.6868    
cufflinks 5.81735 0.0 23.0056   Low
cufflinks 6.879 0.0 26.074   Low
cufflinks 12.2208 0.0 42.1979   High
cufflinks 8.92969 0.0 31.8622    
cufflinks 10.8762 0.0 38.2712    
cufflinks 8.9759 0.0 31.9562    
cufflinks 10.8451 0.0 33.043    
cufflinks 1.719        
cufflinks 0.41       Low
cufflinks 1.887        
cufflinks 3.319       High
cufflinks 4.294       High
cufflinks 0.873        
cufflinks 1.433        
cufflinks 0.815        
cufflinks 2.219        
cufflinks 2.149        
cufflinks 1.429        
cufflinks 0.629       Low
cufflinks 1.569        
cufflinks 2.073        
cufflinks 0.626       Low
cufflinks 1.362        
cufflinks 0.675       Low

0 Strain