Gene : Glyma.08G192300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10593//PTHR10593:SF49 - SERINE/THREONINE-PROTEIN KINASE RIO Genomic Order:  1923
Name:  ? Glyma.08G192300 Secondary Identifier:  ? PAC:30536867
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G192300 0.5kb upstream 0.5kb upstream 3515 true Chr08: 15469624-15473138 Glycine max
Glyma.08G192300 0.5kb upstream 0.5kb upstream 500 false Chr08: 15469624-15470123 Glycine max
Glyma.08G192300 0.5kb downstream 0.5kb downstream 3515 true Chr08: 15470124-15473638 Glycine max
Glyma.08G192300 0.5kb downstream 0.5kb downstream 500 false Chr08: 15473139-15473638 Glycine max
Glyma.08G192300 1.0kb upstream 1.0kb upstream 4015 true Chr08: 15469124-15473138 Glycine max
Glyma.08G192300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 15469124-15470123 Glycine max
Glyma.08G192300 1.0kb downstream 1.0kb downstream 4015 true Chr08: 15470124-15474138 Glycine max
Glyma.08G192300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 15473139-15474138 Glycine max
Glyma.08G192300 2.0kb upstream 2.0kb upstream 5015 true Chr08: 15468124-15473138 Glycine max
Glyma.08G192300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 15468124-15470123 Glycine max
Glyma.08G192300 2.0kb downstream 2.0kb downstream 5015 true Chr08: 15470124-15475138 Glycine max
Glyma.08G192300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 15473139-15475138 Glycine max
Glyma.08G192300 5.0kb upstream 5.0kb upstream 8015 true Chr08: 15465124-15473138 Glycine max
Glyma.08G192300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 15465124-15470123 Glycine max
Glyma.08G192300 5.0kb downstream 5.0kb downstream 8015 true Chr08: 15470124-15478138 Glycine max
Glyma.08G192300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 15473139-15478138 Glycine max
Glyma.08G192300 10.0kb upstream 10.0kb upstream 13015 true Chr08: 15460124-15473138 Glycine max
Glyma.08G192300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 15460124-15470123 Glycine max
Glyma.08G192300 10.0kb downstream 10.0kb downstream 13015 true Chr08: 15470124-15483138 Glycine max
Glyma.08G192300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 15473139-15483138 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300507 5265 Fabidae View MSA
124071742 5270 Rosid View MSA
123752422 5271 Pentapetalae View MSA
122797522 5272 Eudicot View MSA
122049366 5273 Angiosperm View MSA
121344195 5274 Embryophyte View MSA
123379996 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.97317 0.0 11.5547    
cufflinks 8.63846 0.0 23.3809    
cufflinks 3.70838 0.0 10.8515    
cufflinks 10.9276 0.0 29.276    
cufflinks 6.47808 0.0 17.8897    
cufflinks 1.20524 0.0 4.11391   Low
cufflinks 2.37564 0.0 7.42186    
cufflinks 13.8288 0.0 36.8944   High
cufflinks 6.45261 0.0 17.7984    
cufflinks 3.531        
cufflinks 0.163       Low
cufflinks 3.711        
cufflinks 3.044        
cufflinks 3.749        
cufflinks 0.927        
cufflinks 2.344        
cufflinks 0.234       Low
cufflinks 5.216       High
cufflinks 5.174       High
cufflinks 2.035        
cufflinks 0.477       Low
cufflinks 2.082        
cufflinks 3.109        
cufflinks 0.49        
cufflinks 2.275        
cufflinks 0.352       Low

0 Strain