Gene : Glyma.08G192900 G. max Wm82.a2.v1
Defline:  (1 of 37) PTHR11017//PTHR11017:SF162 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN Genomic Order:  1929
Name:  ? Glyma.08G192900 Secondary Identifier:  ? PAC:30540022
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G192900 0.5kb upstream 0.5kb upstream 6208 true Chr08: 15509358-15515565 Glycine max
Glyma.08G192900 0.5kb upstream 0.5kb upstream 500 false Chr08: 15509358-15509857 Glycine max
Glyma.08G192900 0.5kb downstream 0.5kb downstream 6208 true Chr08: 15509858-15516065 Glycine max
Glyma.08G192900 0.5kb downstream 0.5kb downstream 500 false Chr08: 15515566-15516065 Glycine max
Glyma.08G192900 1.0kb upstream 1.0kb upstream 6708 true Chr08: 15508858-15515565 Glycine max
Glyma.08G192900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 15508858-15509857 Glycine max
Glyma.08G192900 1.0kb downstream 1.0kb downstream 6708 true Chr08: 15509858-15516565 Glycine max
Glyma.08G192900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 15515566-15516565 Glycine max
Glyma.08G192900 2.0kb upstream 2.0kb upstream 7708 true Chr08: 15507858-15515565 Glycine max
Glyma.08G192900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 15507858-15509857 Glycine max
Glyma.08G192900 2.0kb downstream 2.0kb downstream 7708 true Chr08: 15509858-15517565 Glycine max
Glyma.08G192900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 15515566-15517565 Glycine max
Glyma.08G192900 5.0kb upstream 5.0kb upstream 10708 true Chr08: 15504858-15515565 Glycine max
Glyma.08G192900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 15504858-15509857 Glycine max
Glyma.08G192900 5.0kb downstream 5.0kb downstream 10708 true Chr08: 15509858-15520565 Glycine max
Glyma.08G192900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 15515566-15520565 Glycine max
Glyma.08G192900 10.0kb upstream 10.0kb upstream 15708 true Chr08: 15499858-15515565 Glycine max
Glyma.08G192900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 15499858-15509857 Glycine max
Glyma.08G192900 10.0kb downstream 10.0kb downstream 15708 true Chr08: 15509858-15525565 Glycine max
Glyma.08G192900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 15515566-15525565 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121657954 5273 Angiosperm View MSA
122298070 5265 Fabidae View MSA
124040644 5270 Rosid View MSA
123611932 5271 Pentapetalae View MSA
122646469 5272 Eudicot View MSA
120929975 5274 Embryophyte View MSA
122970521 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0391683 0.0 0.156483 Low  
cufflinks 0.0320481 0.0 0.129352 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.383188 0.0 2.25345   High
cufflinks 0.110494 0.0 0.528402 Low  
cufflinks 0.0100264 0.0 0.045561 Low Low
cufflinks 0.0163901 0.0 0.0690089 Low  
cufflinks 0.732527 0.0 3.65007   High
cufflinks 0.001     Low Low
cufflinks 0.827       High
cufflinks 0.001     Low Low
cufflinks 0.053     Low  
cufflinks 0.023     Low  
cufflinks 0.065        
cufflinks 0.027     Low  
cufflinks 0.2        
cufflinks 0.001     Low Low
cufflinks 0.024     Low  
cufflinks 0.016     Low  
cufflinks 0.571       High
cufflinks 0.021     Low  
cufflinks 0.005     Low  
cufflinks 1.169       High
cufflinks 0.042     Low  
cufflinks 0.714       High

0 Strain