Gene : Glyma.08G182500 G. max Wm82.a2.v1
Defline:  (1 of 135) PF00892 - EamA-like transporter family (EamA) Genomic Order:  1825
Name:  ? Glyma.08G182500 Secondary Identifier:  ? PAC:30536816
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G182500 0.5kb upstream 0.5kb upstream 4860 true Chr08: 14638929-14643788 Glycine max
Glyma.08G182500 0.5kb upstream 0.5kb upstream 500 false Chr08: 14638929-14639428 Glycine max
Glyma.08G182500 0.5kb downstream 0.5kb downstream 4860 true Chr08: 14639429-14644288 Glycine max
Glyma.08G182500 0.5kb downstream 0.5kb downstream 500 false Chr08: 14643789-14644288 Glycine max
Glyma.08G182500 1.0kb upstream 1.0kb upstream 5360 true Chr08: 14638429-14643788 Glycine max
Glyma.08G182500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 14638429-14639428 Glycine max
Glyma.08G182500 1.0kb downstream 1.0kb downstream 5360 true Chr08: 14639429-14644788 Glycine max
Glyma.08G182500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 14643789-14644788 Glycine max
Glyma.08G182500 2.0kb upstream 2.0kb upstream 6360 true Chr08: 14637429-14643788 Glycine max
Glyma.08G182500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 14637429-14639428 Glycine max
Glyma.08G182500 2.0kb downstream 2.0kb downstream 6360 true Chr08: 14639429-14645788 Glycine max
Glyma.08G182500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 14643789-14645788 Glycine max
Glyma.08G182500 5.0kb upstream 5.0kb upstream 9360 true Chr08: 14634429-14643788 Glycine max
Glyma.08G182500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 14634429-14639428 Glycine max
Glyma.08G182500 5.0kb downstream 5.0kb downstream 9360 true Chr08: 14639429-14648788 Glycine max
Glyma.08G182500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 14643789-14648788 Glycine max
Glyma.08G182500 10.0kb upstream 10.0kb upstream 14360 true Chr08: 14629429-14643788 Glycine max
Glyma.08G182500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 14629429-14639428 Glycine max
Glyma.08G182500 10.0kb downstream 10.0kb downstream 14360 true Chr08: 14639429-14653788 Glycine max
Glyma.08G182500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 14643789-14653788 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313010 5265 Fabidae View MSA
124073140 5270 Rosid View MSA
123752640 5271 Pentapetalae View MSA
122797253 5272 Eudicot View MSA
122050761 5273 Angiosperm View MSA
121312106 5274 Embryophyte View MSA
123349308 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.688847 0.0 5.87362    
cufflinks 0.430094 0.0 2.85411    
cufflinks 0.65235 0.0 4.85398    
cufflinks 36.4877 0.0 177.419 High High
cufflinks 0.546504 0.0 3.41035    
cufflinks 0.0370981 0.0 0.161021 Low Low
cufflinks 6.91782 0.0 35.9609   High
cufflinks 0.365744 0.0 1.83134    
cufflinks 1.90677 0.0 11.0128    
cufflinks 0.019     Low  
cufflinks 0.286       High
cufflinks 0.021     Low  
cufflinks 0.027     Low  
cufflinks 0.006     Low Low
cufflinks 0.049     Low  
cufflinks 0.01     Low  
cufflinks 0.229       High
cufflinks 0.019     Low  
cufflinks 0.025     Low  
cufflinks 0.02     Low  
cufflinks 0.799       High
cufflinks 0.008     Low  
cufflinks 0.011     Low  
cufflinks 1.048       High
cufflinks 0.01     Low  
cufflinks 0.308       High

0 Strain