Gene : Glyma.08G185500 G. max Wm82.a2.v1
Defline:  (1 of 19) PF11891 - Domain of unknown function (DUF3411) (DUF3411) Genomic Order:  1855
Name:  ? Glyma.08G185500 Secondary Identifier:  ? PAC:30540415
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G185500 0.5kb upstream 0.5kb upstream 3947 true Chr08: 14864049-14867995 Glycine max
Glyma.08G185500 0.5kb upstream 0.5kb upstream 500 false Chr08: 14864049-14864548 Glycine max
Glyma.08G185500 0.5kb downstream 0.5kb downstream 3947 true Chr08: 14864549-14868495 Glycine max
Glyma.08G185500 0.5kb downstream 0.5kb downstream 500 false Chr08: 14867996-14868495 Glycine max
Glyma.08G185500 1.0kb upstream 1.0kb upstream 4447 true Chr08: 14863549-14867995 Glycine max
Glyma.08G185500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 14863549-14864548 Glycine max
Glyma.08G185500 1.0kb downstream 1.0kb downstream 4447 true Chr08: 14864549-14868995 Glycine max
Glyma.08G185500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 14867996-14868995 Glycine max
Glyma.08G185500 2.0kb upstream 2.0kb upstream 5447 true Chr08: 14862549-14867995 Glycine max
Glyma.08G185500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 14862549-14864548 Glycine max
Glyma.08G185500 2.0kb downstream 2.0kb downstream 5447 true Chr08: 14864549-14869995 Glycine max
Glyma.08G185500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 14867996-14869995 Glycine max
Glyma.08G185500 5.0kb upstream 5.0kb upstream 8447 true Chr08: 14859549-14867995 Glycine max
Glyma.08G185500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 14859549-14864548 Glycine max
Glyma.08G185500 5.0kb downstream 5.0kb downstream 8447 true Chr08: 14864549-14872995 Glycine max
Glyma.08G185500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 14867996-14872995 Glycine max
Glyma.08G185500 10.0kb upstream 10.0kb upstream 13447 true Chr08: 14854549-14867995 Glycine max
Glyma.08G185500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 14854549-14864548 Glycine max
Glyma.08G185500 10.0kb downstream 10.0kb downstream 13447 true Chr08: 14864549-14877995 Glycine max
Glyma.08G185500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 14867996-14877995 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041223 5273 Angiosperm View MSA
122306875 5265 Fabidae View MSA
124061192 5270 Rosid View MSA
123751024 5271 Pentapetalae View MSA
122790871 5272 Eudicot View MSA
121346356 5274 Embryophyte View MSA
123428208 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.1678 0.0 85.6988 High High
cufflinks 15.3693 0.0 41.0058    
cufflinks 9.72441 0.0 26.1628    
cufflinks 14.6727 0.0 39.1452    
cufflinks 13.6701 0.0 36.4805    
cufflinks 9.11021 0.0 24.5868   Low
cufflinks 15.6501 0.0 41.76    
cufflinks 11.1153 0.0 29.7779    
cufflinks 9.34115 0.0 25.1775    
cufflinks 7.951     High  
cufflinks 4.892       Low
cufflinks 8.558     High  
cufflinks 7.058        
cufflinks 9.096     High  
cufflinks 5.364     High Low
cufflinks 20.325     High High
cufflinks 5.571        
cufflinks 8.43     High  
cufflinks 11.645     High  
cufflinks 26.552     High High
cufflinks 6.234     High  
cufflinks 22.507     High High
cufflinks 21.248     High High
cufflinks 6.219     High  
cufflinks 22.977     High High
cufflinks 5.399       Low

0 Strain