Gene : Glyma.08G177300 G. max Wm82.a2.v1
Defline:  (1 of 7) 4.1.99.12 - 3,4-dihydroxy-2-butanone-4-phosphate synthase / L-3,4-dihydroxybutan-2-one-4-phosphate synthase Genomic Order:  1773
Name:  ? Glyma.08G177300 Secondary Identifier:  ? PAC:30538781
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax RIBOSYN2-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G177300 0.5kb upstream 0.5kb upstream 6196 true Chr08: 14204192-14210387 Glycine max
Glyma.08G177300 0.5kb upstream 0.5kb upstream 500 false Chr08: 14209888-14210387 Glycine max
Glyma.08G177300 0.5kb downstream 0.5kb downstream 6196 true Chr08: 14203692-14209887 Glycine max
Glyma.08G177300 0.5kb downstream 0.5kb downstream 500 false Chr08: 14203692-14204191 Glycine max
Glyma.08G177300 1.0kb upstream 1.0kb upstream 6696 true Chr08: 14204192-14210887 Glycine max
Glyma.08G177300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 14209888-14210887 Glycine max
Glyma.08G177300 1.0kb downstream 1.0kb downstream 6696 true Chr08: 14203192-14209887 Glycine max
Glyma.08G177300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 14203192-14204191 Glycine max
Glyma.08G177300 2.0kb upstream 2.0kb upstream 7696 true Chr08: 14204192-14211887 Glycine max
Glyma.08G177300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 14209888-14211887 Glycine max
Glyma.08G177300 2.0kb downstream 2.0kb downstream 7696 true Chr08: 14202192-14209887 Glycine max
Glyma.08G177300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 14202192-14204191 Glycine max
Glyma.08G177300 5.0kb upstream 5.0kb upstream 10696 true Chr08: 14204192-14214887 Glycine max
Glyma.08G177300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 14209888-14214887 Glycine max
Glyma.08G177300 5.0kb downstream 5.0kb downstream 10696 true Chr08: 14199192-14209887 Glycine max
Glyma.08G177300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 14199192-14204191 Glycine max
Glyma.08G177300 10.0kb upstream 10.0kb upstream 15696 true Chr08: 14204192-14219887 Glycine max
Glyma.08G177300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 14209888-14219887 Glycine max
Glyma.08G177300 10.0kb downstream 10.0kb downstream 15696 true Chr08: 14194192-14209887 Glycine max
Glyma.08G177300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 14194192-14204191 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041066 5273 Angiosperm View MSA
122311687 5265 Fabidae View MSA
124067680 5270 Rosid View MSA
123753464 5271 Pentapetalae View MSA
122788466 5272 Eudicot View MSA
121346573 5274 Embryophyte View MSA
123428678 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.5592 0.0 7.50462    
cufflinks 0.188315 0.0 0.953814 Low Low
cufflinks 8.77448 0.0 31.402    
cufflinks 0.582534 0.0 2.63139    
cufflinks 5.86307 0.0 22.5551    
cufflinks 20.0335 0.0 78.5586   High
cufflinks 0.707703 0.0 4.08529    
cufflinks 0.613691 0.0 2.73559    
cufflinks 4.87967 0.0 19.4354    
cufflinks 0.354        
cufflinks 8.763     High High
cufflinks 0.862        
cufflinks 2.277        
cufflinks 1.886        
cufflinks 1.318        
cufflinks 0.091     Low Low
cufflinks 3.201        
cufflinks 0.219        
cufflinks 0.083     Low Low
cufflinks 0.063     Low Low
cufflinks 6.21     High High
cufflinks 0.137        
cufflinks 0.117        
cufflinks 9.424     High High
cufflinks 0.051     Low Low
cufflinks 6.472     High High

0 Strain