Gene : Glyma.08G177400 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10283//PTHR10283:SF106 - SOLUTE CARRIER FAMILY 13 MEMBER Genomic Order:  1774
Name:  ? Glyma.08G177400 Secondary Identifier:  ? PAC:30536720
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G177400 0.5kb upstream 0.5kb upstream 4464 true Chr08: 14212899-14217362 Glycine max
Glyma.08G177400 0.5kb upstream 0.5kb upstream 500 false Chr08: 14212899-14213398 Glycine max
Glyma.08G177400 0.5kb downstream 0.5kb downstream 4464 true Chr08: 14213399-14217862 Glycine max
Glyma.08G177400 0.5kb downstream 0.5kb downstream 500 false Chr08: 14217363-14217862 Glycine max
Glyma.08G177400 1.0kb upstream 1.0kb upstream 4964 true Chr08: 14212399-14217362 Glycine max
Glyma.08G177400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 14212399-14213398 Glycine max
Glyma.08G177400 1.0kb downstream 1.0kb downstream 4964 true Chr08: 14213399-14218362 Glycine max
Glyma.08G177400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 14217363-14218362 Glycine max
Glyma.08G177400 2.0kb upstream 2.0kb upstream 5964 true Chr08: 14211399-14217362 Glycine max
Glyma.08G177400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 14211399-14213398 Glycine max
Glyma.08G177400 2.0kb downstream 2.0kb downstream 5964 true Chr08: 14213399-14219362 Glycine max
Glyma.08G177400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 14217363-14219362 Glycine max
Glyma.08G177400 5.0kb upstream 5.0kb upstream 8964 true Chr08: 14208399-14217362 Glycine max
Glyma.08G177400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 14208399-14213398 Glycine max
Glyma.08G177400 5.0kb downstream 5.0kb downstream 8964 true Chr08: 14213399-14222362 Glycine max
Glyma.08G177400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 14217363-14222362 Glycine max
Glyma.08G177400 10.0kb upstream 10.0kb upstream 13964 true Chr08: 14203399-14217362 Glycine max
Glyma.08G177400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 14203399-14213398 Glycine max
Glyma.08G177400 10.0kb downstream 10.0kb downstream 13964 true Chr08: 14213399-14227362 Glycine max
Glyma.08G177400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 14217363-14227362 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308289 5265 Fabidae View MSA
124069174 5270 Rosid View MSA
123743248 5271 Pentapetalae View MSA
122791234 5272 Eudicot View MSA
122043898 5273 Angiosperm View MSA
121349578 5274 Embryophyte View MSA
123427902 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.2622 0.0 43.3919   High
cufflinks 5.07592 0.0 14.6091    
cufflinks 2.91072 0.0 9.03717    
cufflinks 11.0922 0.0 29.8821    
cufflinks 5.78172 0.0 16.3234    
cufflinks 1.44122 0.0 4.88992   Low
cufflinks 12.3335 0.0 33.0726   High
cufflinks 5.55952 0.0 15.7997    
cufflinks 2.27881 0.0 7.29182   Low
cufflinks 3.429        
cufflinks 3.553        
cufflinks 2.324        
cufflinks 3.165        
cufflinks 4.003        
cufflinks 3.097        
cufflinks 4.163        
cufflinks 1.132       Low
cufflinks 5.117        
cufflinks 2.975        
cufflinks 2.862        
cufflinks 8.335     High High
cufflinks 3.935        
cufflinks 7.042       High
cufflinks 1.878       Low
cufflinks 4.49        
cufflinks 3.908        

0 Strain