Gene : Glyma.08G178100 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR32332:SF20 - 2-NITROPROPANE DIOXYGENASE-LIKE PROTEIN Genomic Order:  1781
Name:  ? Glyma.08G178100 Secondary Identifier:  ? PAC:30535575
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax FASYN-ELONG-PWY Glycine max pathologic  
Gmax PWY-5156 Glycine max pathologic  
Gmax PWY-5971 Glycine max pathologic  
Gmax PWY-5973 Glycine max pathologic  
Gmax PWY-5989 Glycine max pathologic  
Gmax PWY-6282 Glycine max pathologic  
Gmax PWY-7663 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G178100 0.5kb upstream 0.5kb upstream 8001 true Chr08: 14265063-14273063 Glycine max
Glyma.08G178100 0.5kb upstream 0.5kb upstream 500 false Chr08: 14265063-14265562 Glycine max
Glyma.08G178100 0.5kb downstream 0.5kb downstream 8001 true Chr08: 14265563-14273563 Glycine max
Glyma.08G178100 0.5kb downstream 0.5kb downstream 500 false Chr08: 14273064-14273563 Glycine max
Glyma.08G178100 1.0kb upstream 1.0kb upstream 8501 true Chr08: 14264563-14273063 Glycine max
Glyma.08G178100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 14264563-14265562 Glycine max
Glyma.08G178100 1.0kb downstream 1.0kb downstream 8501 true Chr08: 14265563-14274063 Glycine max
Glyma.08G178100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 14273064-14274063 Glycine max
Glyma.08G178100 2.0kb upstream 2.0kb upstream 9501 true Chr08: 14263563-14273063 Glycine max
Glyma.08G178100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 14263563-14265562 Glycine max
Glyma.08G178100 2.0kb downstream 2.0kb downstream 9501 true Chr08: 14265563-14275063 Glycine max
Glyma.08G178100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 14273064-14275063 Glycine max
Glyma.08G178100 5.0kb upstream 5.0kb upstream 12501 true Chr08: 14260563-14273063 Glycine max
Glyma.08G178100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 14260563-14265562 Glycine max
Glyma.08G178100 5.0kb downstream 5.0kb downstream 12501 true Chr08: 14265563-14278063 Glycine max
Glyma.08G178100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 14273064-14278063 Glycine max
Glyma.08G178100 10.0kb upstream 10.0kb upstream 17501 true Chr08: 14255563-14273063 Glycine max
Glyma.08G178100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 14255563-14265562 Glycine max
Glyma.08G178100 10.0kb downstream 10.0kb downstream 17501 true Chr08: 14265563-14283063 Glycine max
Glyma.08G178100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 14273064-14283063 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301256 5265 Fabidae View MSA
124063505 5270 Rosid View MSA
123738434 5271 Pentapetalae View MSA
122788741 5272 Eudicot View MSA
122044198 5273 Angiosperm View MSA
121347483 5274 Embryophyte View MSA
123428183 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.5158 0.0 36.297    
cufflinks 1.75681 0.0 5.93158   Low
cufflinks 11.758 0.0 31.7308    
cufflinks 8.59392 0.0 23.6805    
cufflinks 6.54375 0.0 18.5139    
cufflinks 8.82458 0.0 24.2662    
cufflinks 15.7431 0.0 42.0908   High
cufflinks 5.01552 0.0 14.6643    
cufflinks 6.57751 0.0 18.5996    
cufflinks 0.802        
cufflinks 5.944     High High
cufflinks 2.988        
cufflinks 4.048        
cufflinks 2.657        
cufflinks 7.182     High High
cufflinks 0.222       Low
cufflinks 2.766        
cufflinks 1.585        
cufflinks 0.574        
cufflinks 0.132       Low
cufflinks 4.852        
cufflinks 0.338       Low
cufflinks 0.386        
cufflinks 5.759       High
cufflinks 0.219       Low
cufflinks 2.726        

0 Strain