Gene : Glyma.08G180600 G. max Wm82.a2.v1
Defline:  (1 of 6) 2.6.1.83 - LL-diaminopimelate aminotransferase / LL-diaminopimelate transaminase Genomic Order:  1806
Name:  ? Glyma.08G180600 Secondary Identifier:  ? PAC:30539902
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5097 Glycine max pathologic  
Gmax PWY-724 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G180600 0.5kb upstream 0.5kb upstream 6520 true Chr08: 14463100-14469619 Glycine max
Glyma.08G180600 0.5kb upstream 0.5kb upstream 500 false Chr08: 14469120-14469619 Glycine max
Glyma.08G180600 0.5kb downstream 0.5kb downstream 6520 true Chr08: 14462600-14469119 Glycine max
Glyma.08G180600 0.5kb downstream 0.5kb downstream 500 false Chr08: 14462600-14463099 Glycine max
Glyma.08G180600 1.0kb upstream 1.0kb upstream 7020 true Chr08: 14463100-14470119 Glycine max
Glyma.08G180600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 14469120-14470119 Glycine max
Glyma.08G180600 1.0kb downstream 1.0kb downstream 7020 true Chr08: 14462100-14469119 Glycine max
Glyma.08G180600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 14462100-14463099 Glycine max
Glyma.08G180600 2.0kb upstream 2.0kb upstream 8020 true Chr08: 14463100-14471119 Glycine max
Glyma.08G180600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 14469120-14471119 Glycine max
Glyma.08G180600 2.0kb downstream 2.0kb downstream 8020 true Chr08: 14461100-14469119 Glycine max
Glyma.08G180600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 14461100-14463099 Glycine max
Glyma.08G180600 5.0kb upstream 5.0kb upstream 11020 true Chr08: 14463100-14474119 Glycine max
Glyma.08G180600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 14469120-14474119 Glycine max
Glyma.08G180600 5.0kb downstream 5.0kb downstream 11020 true Chr08: 14458100-14469119 Glycine max
Glyma.08G180600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 14458100-14463099 Glycine max
Glyma.08G180600 10.0kb upstream 10.0kb upstream 16020 true Chr08: 14463100-14479119 Glycine max
Glyma.08G180600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 14469120-14479119 Glycine max
Glyma.08G180600 10.0kb downstream 10.0kb downstream 16020 true Chr08: 14453100-14469119 Glycine max
Glyma.08G180600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 14453100-14463099 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304848 5265 Fabidae View MSA
124072103 5270 Rosid View MSA
123748238 5271 Pentapetalae View MSA
122790748 5272 Eudicot View MSA
122049713 5273 Angiosperm View MSA
121311556 5274 Embryophyte View MSA
123348837 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.13604 0.0 3.95959    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 95.4477 0.0 300.851 High High
cufflinks 0.0188018 0.0 0.0814412 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.87969 0.0 11.5342    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.184358 0.0 0.711263 Low  
cufflinks 1.05879 0.0 3.71084    
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.032     Low  
cufflinks 18.872     High High
cufflinks 0.016     Low  
cufflinks 0.005     Low  
cufflinks 0.003     Low  
cufflinks 0.009     Low  
cufflinks 0.039     Low  
cufflinks 0.004     Low  
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.048     Low  
cufflinks 0.003     Low  
cufflinks 0.22        

0 Strain