Gene : Glyma.08G180700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10971//PTHR10971:SF16 - MRNA EXPORT FACTOR AND BUB3 Genomic Order:  1807
Name:  ? Glyma.08G180700 Secondary Identifier:  ? PAC:30539256
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G180700 0.5kb upstream 0.5kb upstream 5552 true Chr08: 14478156-14483707 Glycine max
Glyma.08G180700 0.5kb upstream 0.5kb upstream 500 false Chr08: 14478156-14478655 Glycine max
Glyma.08G180700 0.5kb downstream 0.5kb downstream 5552 true Chr08: 14478656-14484207 Glycine max
Glyma.08G180700 0.5kb downstream 0.5kb downstream 500 false Chr08: 14483708-14484207 Glycine max
Glyma.08G180700 1.0kb upstream 1.0kb upstream 6052 true Chr08: 14477656-14483707 Glycine max
Glyma.08G180700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 14477656-14478655 Glycine max
Glyma.08G180700 1.0kb downstream 1.0kb downstream 6052 true Chr08: 14478656-14484707 Glycine max
Glyma.08G180700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 14483708-14484707 Glycine max
Glyma.08G180700 2.0kb upstream 2.0kb upstream 7052 true Chr08: 14476656-14483707 Glycine max
Glyma.08G180700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 14476656-14478655 Glycine max
Glyma.08G180700 2.0kb downstream 2.0kb downstream 7052 true Chr08: 14478656-14485707 Glycine max
Glyma.08G180700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 14483708-14485707 Glycine max
Glyma.08G180700 5.0kb upstream 5.0kb upstream 10052 true Chr08: 14473656-14483707 Glycine max
Glyma.08G180700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 14473656-14478655 Glycine max
Glyma.08G180700 5.0kb downstream 5.0kb downstream 10052 true Chr08: 14478656-14488707 Glycine max
Glyma.08G180700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 14483708-14488707 Glycine max
Glyma.08G180700 10.0kb upstream 10.0kb upstream 15052 true Chr08: 14468656-14483707 Glycine max
Glyma.08G180700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 14468656-14478655 Glycine max
Glyma.08G180700 10.0kb downstream 10.0kb downstream 15052 true Chr08: 14478656-14493707 Glycine max
Glyma.08G180700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 14483708-14493707 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302541 5265 Fabidae View MSA
124073697 5270 Rosid View MSA
123740132 5271 Pentapetalae View MSA
122786172 5272 Eudicot View MSA
122042372 5273 Angiosperm View MSA
121348493 5274 Embryophyte View MSA
123423920 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.84264 0.0 19.3026   Low
cufflinks 7.22749 0.0 20.2487    
cufflinks 13.1175 0.0 35.2405    
cufflinks 13.8831 0.0 37.2478   High
cufflinks 6.65293 0.0 18.841   Low
cufflinks 7.29869 0.0 20.4523    
cufflinks 15.7055 0.0 42.0014   High
cufflinks 12.4799 0.0 33.6067    
cufflinks 10.0478 0.0 27.3932    
cufflinks 1.582        
cufflinks 1.466        
cufflinks 3.928       High
cufflinks 1.389        
cufflinks 1.258        
cufflinks 1.963        
cufflinks 1.464        
cufflinks 1.759        
cufflinks 3.474       High
cufflinks 2.948       High
cufflinks 1.673        
cufflinks 1.229       Low
cufflinks 1.941        
cufflinks 1.583        
cufflinks 1.112       Low
cufflinks 1.891        
cufflinks 1.424        

0 Strain