Gene : Glyma.08G181400 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR22951//PTHR22951:SF12 - CLATHRIN ASSEMBLY PROTEIN Genomic Order:  1814
Name:  ? Glyma.08G181400 Secondary Identifier:  ? PAC:30535526
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G181400 0.5kb upstream 0.5kb upstream 3583 true Chr08: 14563214-14566796 Glycine max
Glyma.08G181400 0.5kb upstream 0.5kb upstream 500 false Chr08: 14566297-14566796 Glycine max
Glyma.08G181400 0.5kb downstream 0.5kb downstream 3583 true Chr08: 14562714-14566296 Glycine max
Glyma.08G181400 0.5kb downstream 0.5kb downstream 500 false Chr08: 14562714-14563213 Glycine max
Glyma.08G181400 1.0kb upstream 1.0kb upstream 4083 true Chr08: 14563214-14567296 Glycine max
Glyma.08G181400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 14566297-14567296 Glycine max
Glyma.08G181400 1.0kb downstream 1.0kb downstream 4083 true Chr08: 14562214-14566296 Glycine max
Glyma.08G181400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 14562214-14563213 Glycine max
Glyma.08G181400 2.0kb upstream 2.0kb upstream 5083 true Chr08: 14563214-14568296 Glycine max
Glyma.08G181400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 14566297-14568296 Glycine max
Glyma.08G181400 2.0kb downstream 2.0kb downstream 5083 true Chr08: 14561214-14566296 Glycine max
Glyma.08G181400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 14561214-14563213 Glycine max
Glyma.08G181400 5.0kb upstream 5.0kb upstream 8083 true Chr08: 14563214-14571296 Glycine max
Glyma.08G181400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 14566297-14571296 Glycine max
Glyma.08G181400 5.0kb downstream 5.0kb downstream 8083 true Chr08: 14558214-14566296 Glycine max
Glyma.08G181400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 14558214-14563213 Glycine max
Glyma.08G181400 10.0kb upstream 10.0kb upstream 13083 true Chr08: 14563214-14576296 Glycine max
Glyma.08G181400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 14566297-14576296 Glycine max
Glyma.08G181400 10.0kb downstream 10.0kb downstream 13083 true Chr08: 14553214-14566296 Glycine max
Glyma.08G181400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 14553214-14563213 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307367 5265 Fabidae View MSA
124066934 5270 Rosid View MSA
123739341 5271 Pentapetalae View MSA
122788140 5272 Eudicot View MSA
122050548 5273 Angiosperm View MSA
123428889 5275 Viridiplantae View MSA
121311984 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0159924 0.0 0.0715407 Low  
cufflinks 22.8197 0.0 83.4558 High High
cufflinks 0.039263 0.0 0.159509 Low  
cufflinks 0.0416377 0.0 0.169058 Low  
cufflinks 1.7084 0.0 8.03948    
cufflinks 0.605658 0.0 3.42246    
cufflinks 0.0693142 0.0 0.273723 Low  
cufflinks 0.0410546 0.0 0.167199 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.028     Low  
cufflinks 2.454       High
cufflinks 0.043     Low  
cufflinks 0.011     Low  
cufflinks 0.038     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low Low
cufflinks 2.134       High
cufflinks 0.002     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.017     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  

0 Strain