Gene : Glyma.08G219700 G. max Wm82.a2.v1
Defline:  (1 of 7) PF15054 - Domain of unknown function (DUF4535) (DUF4535) Genomic Order:  2197
Name:  ? Glyma.08G219700 Secondary Identifier:  ? PAC:30536058
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G219700 0.5kb upstream 0.5kb upstream 3339 true Chr08: 17857103-17860441 Glycine max
Glyma.08G219700 0.5kb upstream 0.5kb upstream 500 false Chr08: 17857103-17857602 Glycine max
Glyma.08G219700 0.5kb downstream 0.5kb downstream 3339 true Chr08: 17857603-17860941 Glycine max
Glyma.08G219700 0.5kb downstream 0.5kb downstream 500 false Chr08: 17860442-17860941 Glycine max
Glyma.08G219700 1.0kb upstream 1.0kb upstream 3839 true Chr08: 17856603-17860441 Glycine max
Glyma.08G219700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 17856603-17857602 Glycine max
Glyma.08G219700 1.0kb downstream 1.0kb downstream 3839 true Chr08: 17857603-17861441 Glycine max
Glyma.08G219700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 17860442-17861441 Glycine max
Glyma.08G219700 2.0kb upstream 2.0kb upstream 4839 true Chr08: 17855603-17860441 Glycine max
Glyma.08G219700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 17855603-17857602 Glycine max
Glyma.08G219700 2.0kb downstream 2.0kb downstream 4839 true Chr08: 17857603-17862441 Glycine max
Glyma.08G219700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 17860442-17862441 Glycine max
Glyma.08G219700 5.0kb upstream 5.0kb upstream 7839 true Chr08: 17852603-17860441 Glycine max
Glyma.08G219700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 17852603-17857602 Glycine max
Glyma.08G219700 5.0kb downstream 5.0kb downstream 7839 true Chr08: 17857603-17865441 Glycine max
Glyma.08G219700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 17860442-17865441 Glycine max
Glyma.08G219700 10.0kb upstream 10.0kb upstream 12839 true Chr08: 17847603-17860441 Glycine max
Glyma.08G219700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 17847603-17857602 Glycine max
Glyma.08G219700 10.0kb downstream 10.0kb downstream 12839 true Chr08: 17857603-17870441 Glycine max
Glyma.08G219700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 17860442-17870441 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029837 5273 Angiosperm View MSA
122240484 5265 Fabidae Singleton cluster - no MSA
123985540 5270 Rosid Singleton cluster - no MSA
123753014 5271 Pentapetalae View MSA
122789672 5272 Eudicot View MSA
121343787 5274 Embryophyte View MSA
123379919 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.1327 0.0 14.2106    
cufflinks 2.8641 0.0 10.1358    
cufflinks 3.38083 0.0 11.7577    
cufflinks 2.74524 0.0 9.74659    
cufflinks 6.11411 0.0 20.0613   High
cufflinks 6.5345 0.0 21.1845   High
cufflinks 1.87245 0.0 6.83603   Low
cufflinks 3.79285 0.0 13.1001    
cufflinks 5.50251 0.0 18.213    
cufflinks 1.831        
cufflinks 1.225        
cufflinks 1.024        
cufflinks 2.481       High
cufflinks 3.047       High
cufflinks 1.113        
cufflinks 0.616       Low
cufflinks 2.19       High
cufflinks 1.151        
cufflinks 0.602       Low
cufflinks 0.791        
cufflinks 1.235        
cufflinks 0.713        
cufflinks 1.042        
cufflinks 1.299        
cufflinks 0.562       Low
cufflinks 1.348        

0 Strain