Gene : Glyma.08G220800 G. max Wm82.a2.v1
Defline:  (1 of 354) PF00847 - AP2 domain (AP2) Genomic Order:  2208
Name:  ? Glyma.08G220800 Secondary Identifier:  ? PAC:30540566
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G220800 0.5kb upstream 0.5kb upstream 4381 true Chr08: 17942039-17946419 Glycine max
Glyma.08G220800 0.5kb upstream 0.5kb upstream 500 false Chr08: 17942039-17942538 Glycine max
Glyma.08G220800 0.5kb downstream 0.5kb downstream 4381 true Chr08: 17942539-17946919 Glycine max
Glyma.08G220800 0.5kb downstream 0.5kb downstream 500 false Chr08: 17946420-17946919 Glycine max
Glyma.08G220800 1.0kb upstream 1.0kb upstream 4881 true Chr08: 17941539-17946419 Glycine max
Glyma.08G220800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 17941539-17942538 Glycine max
Glyma.08G220800 1.0kb downstream 1.0kb downstream 4881 true Chr08: 17942539-17947419 Glycine max
Glyma.08G220800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 17946420-17947419 Glycine max
Glyma.08G220800 2.0kb upstream 2.0kb upstream 5881 true Chr08: 17940539-17946419 Glycine max
Glyma.08G220800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 17940539-17942538 Glycine max
Glyma.08G220800 2.0kb downstream 2.0kb downstream 5881 true Chr08: 17942539-17948419 Glycine max
Glyma.08G220800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 17946420-17948419 Glycine max
Glyma.08G220800 5.0kb upstream 5.0kb upstream 8881 true Chr08: 17937539-17946419 Glycine max
Glyma.08G220800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 17937539-17942538 Glycine max
Glyma.08G220800 5.0kb downstream 5.0kb downstream 8881 true Chr08: 17942539-17951419 Glycine max
Glyma.08G220800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 17946420-17951419 Glycine max
Glyma.08G220800 10.0kb upstream 10.0kb upstream 13881 true Chr08: 17932539-17946419 Glycine max
Glyma.08G220800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 17932539-17942538 Glycine max
Glyma.08G220800 10.0kb downstream 10.0kb downstream 13881 true Chr08: 17942539-17956419 Glycine max
Glyma.08G220800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 17946420-17956419 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297114 5265 Fabidae View MSA
124061402 5270 Rosid View MSA
123744110 5271 Pentapetalae View MSA
122797615 5272 Eudicot View MSA
122048142 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121350345 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.669021 0.0 3.14171    
cufflinks 4.02412 0.0 16.778    
cufflinks 0.625182 0.0 2.93718    
cufflinks 4.15442 0.0 17.5022    
cufflinks 1.10942 0.0 4.95091    
cufflinks 4.82475 0.0 14.5965    
cufflinks 0.071777 0.0 0.291484 Low Low
cufflinks 1.65242 0.0 10.8479    
cufflinks 2.28069 0.0 8.38828    
cufflinks 0.665        
cufflinks 0.115       Low
cufflinks 0.403        
cufflinks 0.132        
cufflinks 0.02     Low Low
cufflinks 0.207        
cufflinks 0.803        
cufflinks 0.313        
cufflinks 1.285       High
cufflinks 0.841        
cufflinks 0.423        
cufflinks 0.128        
cufflinks 0.658        
cufflinks 0.68        
cufflinks 0.352        
cufflinks 0.707        
cufflinks 0.185        

0 Strain