Gene : Glyma.08G221700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10288:SF174 - RNA-BINDING KH DOMAIN-CONTAINING PROTEIN Genomic Order:  2217
Name:  ? Glyma.08G221700 Secondary Identifier:  ? PAC:30540062
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G221700 0.5kb upstream 0.5kb upstream 3942 true Chr08: 18002478-18006419 Glycine max
Glyma.08G221700 0.5kb upstream 0.5kb upstream 500 false Chr08: 18002478-18002977 Glycine max
Glyma.08G221700 0.5kb downstream 0.5kb downstream 3942 true Chr08: 18002978-18006919 Glycine max
Glyma.08G221700 0.5kb downstream 0.5kb downstream 500 false Chr08: 18006420-18006919 Glycine max
Glyma.08G221700 1.0kb upstream 1.0kb upstream 4442 true Chr08: 18001978-18006419 Glycine max
Glyma.08G221700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 18001978-18002977 Glycine max
Glyma.08G221700 1.0kb downstream 1.0kb downstream 4442 true Chr08: 18002978-18007419 Glycine max
Glyma.08G221700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 18006420-18007419 Glycine max
Glyma.08G221700 2.0kb upstream 2.0kb upstream 5442 true Chr08: 18000978-18006419 Glycine max
Glyma.08G221700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 18000978-18002977 Glycine max
Glyma.08G221700 2.0kb downstream 2.0kb downstream 5442 true Chr08: 18002978-18008419 Glycine max
Glyma.08G221700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 18006420-18008419 Glycine max
Glyma.08G221700 5.0kb upstream 5.0kb upstream 8442 true Chr08: 17997978-18006419 Glycine max
Glyma.08G221700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 17997978-18002977 Glycine max
Glyma.08G221700 5.0kb downstream 5.0kb downstream 8442 true Chr08: 18002978-18011419 Glycine max
Glyma.08G221700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 18006420-18011419 Glycine max
Glyma.08G221700 10.0kb upstream 10.0kb upstream 13442 true Chr08: 17992978-18006419 Glycine max
Glyma.08G221700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 17992978-18002977 Glycine max
Glyma.08G221700 10.0kb downstream 10.0kb downstream 13442 true Chr08: 18002978-18016419 Glycine max
Glyma.08G221700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 18006420-18016419 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305657 5265 Fabidae View MSA
124071830 5270 Rosid View MSA
123744817 5271 Pentapetalae View MSA
122797103 5272 Eudicot View MSA
122049280 5273 Angiosperm View MSA
121348372 5274 Embryophyte View MSA
123428845 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.0426 0.0 34.7998    
cufflinks 12.1738 0.0 41.7698    
cufflinks 8.89977 0.0 31.2977    
cufflinks 15.1189 0.0 51.2591   High
cufflinks 8.91381 0.0 31.248    
cufflinks 6.41892 0.0 23.8375   Low
cufflinks 16.8035 0.0 56.859   High
cufflinks 8.4639 0.0 30.0115    
cufflinks 9.14768 0.0 32.0369    
cufflinks 2.374        
cufflinks 0.916       Low
cufflinks 3.27       High
cufflinks 2.257        
cufflinks 2.019        
cufflinks 1.888        
cufflinks 1.497        
cufflinks 1.323        
cufflinks 2.894       High
cufflinks 4.407       High
cufflinks 1.684        
cufflinks 1.381        
cufflinks 1.882        
cufflinks 2.497        
cufflinks 1.45        
cufflinks 1.643        
cufflinks 1.171       Low

0 Strain