Gene : Glyma.08G222300 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR31288:SF5 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MXL8-RELATED Genomic Order:  2223
Name:  ? Glyma.08G222300 Secondary Identifier:  ? PAC:30539005
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G222300 0.5kb upstream 0.5kb upstream 4376 true Chr08: 18059686-18064061 Glycine max
Glyma.08G222300 0.5kb upstream 0.5kb upstream 500 false Chr08: 18063562-18064061 Glycine max
Glyma.08G222300 0.5kb downstream 0.5kb downstream 4376 true Chr08: 18059186-18063561 Glycine max
Glyma.08G222300 0.5kb downstream 0.5kb downstream 500 false Chr08: 18059186-18059685 Glycine max
Glyma.08G222300 1.0kb upstream 1.0kb upstream 4876 true Chr08: 18059686-18064561 Glycine max
Glyma.08G222300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 18063562-18064561 Glycine max
Glyma.08G222300 1.0kb downstream 1.0kb downstream 4876 true Chr08: 18058686-18063561 Glycine max
Glyma.08G222300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 18058686-18059685 Glycine max
Glyma.08G222300 2.0kb upstream 2.0kb upstream 5876 true Chr08: 18059686-18065561 Glycine max
Glyma.08G222300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 18063562-18065561 Glycine max
Glyma.08G222300 2.0kb downstream 2.0kb downstream 5876 true Chr08: 18057686-18063561 Glycine max
Glyma.08G222300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 18057686-18059685 Glycine max
Glyma.08G222300 5.0kb upstream 5.0kb upstream 8876 true Chr08: 18059686-18068561 Glycine max
Glyma.08G222300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 18063562-18068561 Glycine max
Glyma.08G222300 5.0kb downstream 5.0kb downstream 8876 true Chr08: 18054686-18063561 Glycine max
Glyma.08G222300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 18054686-18059685 Glycine max
Glyma.08G222300 10.0kb upstream 10.0kb upstream 13876 true Chr08: 18059686-18073561 Glycine max
Glyma.08G222300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 18063562-18073561 Glycine max
Glyma.08G222300 10.0kb downstream 10.0kb downstream 13876 true Chr08: 18049686-18063561 Glycine max
Glyma.08G222300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 18049686-18059685 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041437 5273 Angiosperm View MSA
122304127 5265 Fabidae View MSA
124067612 5270 Rosid View MSA
123741790 5271 Pentapetalae View MSA
122786128 5272 Eudicot View MSA
121350497 5274 Embryophyte View MSA
123381757 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.2541 0.0 38.0896   Low
cufflinks 34.0846 0.0 93.4328 High  
cufflinks 10.1469 0.0 27.3597   Low
cufflinks 84.3401 0.0 259.702 High High
cufflinks 62.3004 0.0 181.823 High  
cufflinks 36.8358 0.0 101.45 High  
cufflinks 24.0845 0.0 64.6325 High  
cufflinks 56.5804 0.0 163.779 High  
cufflinks 54.1126 0.0 155.605 High  
cufflinks 39.362     High  
cufflinks 2.226       Low
cufflinks 11.572     High  
cufflinks 47.835     High High
cufflinks 59.705     High High
cufflinks 4.061       Low
cufflinks 21.083     High  
cufflinks 8.177     High  
cufflinks 43.092     High High
cufflinks 18.284     High  
cufflinks 22.165     High  
cufflinks 6.905     High  
cufflinks 28.939     High  
cufflinks 19.777     High  
cufflinks 3.787       Low
cufflinks 22.497     High  
cufflinks 8.613     High  

0 Strain