Gene : Glyma.08G222400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10635 - COATOMER SUBUNIT BETA Genomic Order:  2224
Name:  ? Glyma.08G222400 Secondary Identifier:  ? PAC:30538021
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G222400 0.5kb upstream 0.5kb upstream 6264 true Chr08: 18067718-18073981 Glycine max
Glyma.08G222400 0.5kb upstream 0.5kb upstream 500 false Chr08: 18067718-18068217 Glycine max
Glyma.08G222400 0.5kb downstream 0.5kb downstream 6264 true Chr08: 18068218-18074481 Glycine max
Glyma.08G222400 0.5kb downstream 0.5kb downstream 500 false Chr08: 18073982-18074481 Glycine max
Glyma.08G222400 1.0kb upstream 1.0kb upstream 6764 true Chr08: 18067218-18073981 Glycine max
Glyma.08G222400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 18067218-18068217 Glycine max
Glyma.08G222400 1.0kb downstream 1.0kb downstream 6764 true Chr08: 18068218-18074981 Glycine max
Glyma.08G222400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 18073982-18074981 Glycine max
Glyma.08G222400 2.0kb upstream 2.0kb upstream 7764 true Chr08: 18066218-18073981 Glycine max
Glyma.08G222400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 18066218-18068217 Glycine max
Glyma.08G222400 2.0kb downstream 2.0kb downstream 7764 true Chr08: 18068218-18075981 Glycine max
Glyma.08G222400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 18073982-18075981 Glycine max
Glyma.08G222400 5.0kb upstream 5.0kb upstream 10764 true Chr08: 18063218-18073981 Glycine max
Glyma.08G222400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 18063218-18068217 Glycine max
Glyma.08G222400 5.0kb downstream 5.0kb downstream 10764 true Chr08: 18068218-18078981 Glycine max
Glyma.08G222400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 18073982-18078981 Glycine max
Glyma.08G222400 10.0kb upstream 10.0kb upstream 15764 true Chr08: 18058218-18073981 Glycine max
Glyma.08G222400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 18058218-18068217 Glycine max
Glyma.08G222400 10.0kb downstream 10.0kb downstream 15764 true Chr08: 18068218-18083981 Glycine max
Glyma.08G222400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 18073982-18083981 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304906 5265 Fabidae View MSA
124065848 5270 Rosid View MSA
123753306 5271 Pentapetalae View MSA
122786430 5272 Eudicot View MSA
122042761 5273 Angiosperm View MSA
121349465 5274 Embryophyte View MSA
123426432 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.478 0.0 94.9714 High  
cufflinks 27.3504 0.0 108.63 High  
cufflinks 13.751 0.0 41.8852   Low
cufflinks 46.4181 0.0 189.324 High  
cufflinks 53.5231 0.0 232.131 High High
cufflinks 36.8252 0.0 161.088 High  
cufflinks 30.3759 0.0 124.116 High  
cufflinks 44.0693 0.0 177.859 High  
cufflinks 28.9902 0.0 117.774 High  
cufflinks 15.975     High High
cufflinks 2.721       Low
cufflinks 5.871        
cufflinks 17.21     High High
cufflinks 21.305     High High
cufflinks 2.884       Low
cufflinks 7.052        
cufflinks 4.833        
cufflinks 10.196     High  
cufflinks 10.952     High  
cufflinks 4.782        
cufflinks 5.084        
cufflinks 5.776        
cufflinks 7.062        
cufflinks 4.712        
cufflinks 5.35        
cufflinks 5.77        

0 Strain