Gene : Glyma.08G223600 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11122//PTHR11122:SF22 - APOSPORY-ASSOCIATED PROTEIN C-RELATED Genomic Order:  2236
Name:  ? Glyma.08G223600 Secondary Identifier:  ? PAC:30538154
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G223600 0.5kb upstream 0.5kb upstream 5376 true Chr08: 18138052-18143427 Glycine max
Glyma.08G223600 0.5kb upstream 0.5kb upstream 500 false Chr08: 18142928-18143427 Glycine max
Glyma.08G223600 0.5kb downstream 0.5kb downstream 5376 true Chr08: 18137552-18142927 Glycine max
Glyma.08G223600 0.5kb downstream 0.5kb downstream 500 false Chr08: 18137552-18138051 Glycine max
Glyma.08G223600 1.0kb upstream 1.0kb upstream 5876 true Chr08: 18138052-18143927 Glycine max
Glyma.08G223600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 18142928-18143927 Glycine max
Glyma.08G223600 1.0kb downstream 1.0kb downstream 5876 true Chr08: 18137052-18142927 Glycine max
Glyma.08G223600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 18137052-18138051 Glycine max
Glyma.08G223600 2.0kb upstream 2.0kb upstream 6876 true Chr08: 18138052-18144927 Glycine max
Glyma.08G223600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 18142928-18144927 Glycine max
Glyma.08G223600 2.0kb downstream 2.0kb downstream 6876 true Chr08: 18136052-18142927 Glycine max
Glyma.08G223600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 18136052-18138051 Glycine max
Glyma.08G223600 5.0kb upstream 5.0kb upstream 9876 true Chr08: 18138052-18147927 Glycine max
Glyma.08G223600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 18142928-18147927 Glycine max
Glyma.08G223600 5.0kb downstream 5.0kb downstream 9876 true Chr08: 18133052-18142927 Glycine max
Glyma.08G223600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 18133052-18138051 Glycine max
Glyma.08G223600 10.0kb upstream 10.0kb upstream 14876 true Chr08: 18138052-18152927 Glycine max
Glyma.08G223600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 18142928-18152927 Glycine max
Glyma.08G223600 10.0kb downstream 10.0kb downstream 14876 true Chr08: 18128052-18142927 Glycine max
Glyma.08G223600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 18128052-18138051 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301766 5265 Fabidae View MSA
124064506 5270 Rosid View MSA
123740956 5271 Pentapetalae View MSA
122787587 5272 Eudicot View MSA
122047038 5273 Angiosperm View MSA
121347358 5274 Embryophyte View MSA
123428689 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.47753 0.0 5.25876    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.098     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.518       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  

0 Strain