Gene : Glyma.08G223800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10621:SF9 - F12F1.16 PROTEIN-RELATED Genomic Order:  2238
Name:  ? Glyma.08G223800 Secondary Identifier:  ? PAC:30540551
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G223800 0.5kb upstream 0.5kb upstream 6427 true Chr08: 18162279-18168705 Glycine max
Glyma.08G223800 0.5kb upstream 0.5kb upstream 500 false Chr08: 18162279-18162778 Glycine max
Glyma.08G223800 0.5kb downstream 0.5kb downstream 6427 true Chr08: 18162779-18169205 Glycine max
Glyma.08G223800 0.5kb downstream 0.5kb downstream 500 false Chr08: 18168706-18169205 Glycine max
Glyma.08G223800 1.0kb upstream 1.0kb upstream 6927 true Chr08: 18161779-18168705 Glycine max
Glyma.08G223800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 18161779-18162778 Glycine max
Glyma.08G223800 1.0kb downstream 1.0kb downstream 6927 true Chr08: 18162779-18169705 Glycine max
Glyma.08G223800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 18168706-18169705 Glycine max
Glyma.08G223800 2.0kb upstream 2.0kb upstream 7927 true Chr08: 18160779-18168705 Glycine max
Glyma.08G223800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 18160779-18162778 Glycine max
Glyma.08G223800 2.0kb downstream 2.0kb downstream 7927 true Chr08: 18162779-18170705 Glycine max
Glyma.08G223800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 18168706-18170705 Glycine max
Glyma.08G223800 5.0kb upstream 5.0kb upstream 10927 true Chr08: 18157779-18168705 Glycine max
Glyma.08G223800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 18157779-18162778 Glycine max
Glyma.08G223800 5.0kb downstream 5.0kb downstream 10927 true Chr08: 18162779-18173705 Glycine max
Glyma.08G223800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 18168706-18173705 Glycine max
Glyma.08G223800 10.0kb upstream 10.0kb upstream 15927 true Chr08: 18152779-18168705 Glycine max
Glyma.08G223800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 18152779-18162778 Glycine max
Glyma.08G223800 10.0kb downstream 10.0kb downstream 15927 true Chr08: 18162779-18178705 Glycine max
Glyma.08G223800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 18168706-18178705 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312076 5265 Fabidae View MSA
124061824 5270 Rosid View MSA
123740240 5271 Pentapetalae View MSA
122785996 5272 Eudicot View MSA
122046102 5273 Angiosperm View MSA
121350140 5274 Embryophyte View MSA
123423951 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.2172 0.0 40.172   Low
cufflinks 30.0332 0.0 91.0044 High  
cufflinks 16.9236 0.0 60.1748   Low
cufflinks 22.9363 0.0 81.9632 High  
cufflinks 37.0399 0.0 134.129 High  
cufflinks 33.6153 0.0 103.244 High  
cufflinks 50.4282 0.0 195.53 High High
cufflinks 22.4715 0.0 66.7546 High  
cufflinks 31.0866 0.0 94.7563 High  
cufflinks 2.685        
cufflinks 1.804       Low
cufflinks 2.377        
cufflinks 5.694       High
cufflinks 7.156     High High
cufflinks 1.7       Low
cufflinks 2.962        
cufflinks 2.397        
cufflinks 2.985        
cufflinks 3.574        
cufflinks 2.983        
cufflinks 2.097        
cufflinks 2.753        
cufflinks 3.056        
cufflinks 1.927        
cufflinks 2.896        
cufflinks 2.201        

0 Strain