Gene : Glyma.08G224200 G. max Wm82.a2.v1
Defline:  (1 of 1) 1.3.1.21 - 7-dehydrocholesterol reductase / Sterol Delta(7)-reductase Genomic Order:  2242
Name:  ? Glyma.08G224200 Secondary Identifier:  ? PAC:30540619
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-2541 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G224200 0.5kb upstream 0.5kb upstream 4491 true Chr08: 18187405-18191895 Glycine max
Glyma.08G224200 0.5kb upstream 0.5kb upstream 500 false Chr08: 18187405-18187904 Glycine max
Glyma.08G224200 0.5kb downstream 0.5kb downstream 4491 true Chr08: 18187905-18192395 Glycine max
Glyma.08G224200 0.5kb downstream 0.5kb downstream 500 false Chr08: 18191896-18192395 Glycine max
Glyma.08G224200 1.0kb upstream 1.0kb upstream 4991 true Chr08: 18186905-18191895 Glycine max
Glyma.08G224200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 18186905-18187904 Glycine max
Glyma.08G224200 1.0kb downstream 1.0kb downstream 4991 true Chr08: 18187905-18192895 Glycine max
Glyma.08G224200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 18191896-18192895 Glycine max
Glyma.08G224200 2.0kb upstream 2.0kb upstream 5991 true Chr08: 18185905-18191895 Glycine max
Glyma.08G224200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 18185905-18187904 Glycine max
Glyma.08G224200 2.0kb downstream 2.0kb downstream 5991 true Chr08: 18187905-18193895 Glycine max
Glyma.08G224200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 18191896-18193895 Glycine max
Glyma.08G224200 5.0kb upstream 5.0kb upstream 8991 true Chr08: 18182905-18191895 Glycine max
Glyma.08G224200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 18182905-18187904 Glycine max
Glyma.08G224200 5.0kb downstream 5.0kb downstream 8991 true Chr08: 18187905-18196895 Glycine max
Glyma.08G224200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 18191896-18196895 Glycine max
Glyma.08G224200 10.0kb upstream 10.0kb upstream 13991 true Chr08: 18177905-18191895 Glycine max
Glyma.08G224200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 18177905-18187904 Glycine max
Glyma.08G224200 10.0kb downstream 10.0kb downstream 13991 true Chr08: 18187905-18201895 Glycine max
Glyma.08G224200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 18191896-18201895 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308667 5265 Fabidae View MSA
124066966 5270 Rosid View MSA
123738626 5271 Pentapetalae View MSA
122793044 5272 Eudicot View MSA
122045488 5273 Angiosperm View MSA
121344145 5274 Embryophyte View MSA
123426486 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 80.843 0.0 422.622 High High
cufflinks 30.1903 0.0 126.793 High Low
cufflinks 34.0744 0.0 143.546 High  
cufflinks 60.9952 0.0 287.841 High  
cufflinks 61.7281 0.0 294.553 High  
cufflinks 31.7667 0.0 120.001 High Low
cufflinks 40.0094 0.0 170.438 High  
cufflinks 52.4349 0.0 238.767 High  
cufflinks 39.8576 0.0 150.942 High  
cufflinks 11.098     High  
cufflinks 2.019       Low
cufflinks 7.092        
cufflinks 11.4     High  
cufflinks 13.549     High High
cufflinks 3.255       Low
cufflinks 9.828     High  
cufflinks 3.747       Low
cufflinks 9.544     High  
cufflinks 6.517        
cufflinks 11.027     High  
cufflinks 3.707       Low
cufflinks 11.461     High  
cufflinks 10.004     High  
cufflinks 3.025       Low
cufflinks 9.803     High  
cufflinks 5.188        

0 Strain