Gene : Glyma.08G213600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11564:SF5 - SIGNAL RECOGNITION PARTICLE 54 KDA PROTEIN Genomic Order:  2136
Name:  ? Glyma.08G213600 Secondary Identifier:  ? PAC:30536169
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G213600 0.5kb upstream 0.5kb upstream 3969 true Chr08: 17239144-17243112 Glycine max
Glyma.08G213600 0.5kb upstream 0.5kb upstream 500 false Chr08: 17242613-17243112 Glycine max
Glyma.08G213600 0.5kb downstream 0.5kb downstream 3969 true Chr08: 17238644-17242612 Glycine max
Glyma.08G213600 0.5kb downstream 0.5kb downstream 500 false Chr08: 17238644-17239143 Glycine max
Glyma.08G213600 1.0kb upstream 1.0kb upstream 4469 true Chr08: 17239144-17243612 Glycine max
Glyma.08G213600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 17242613-17243612 Glycine max
Glyma.08G213600 1.0kb downstream 1.0kb downstream 4469 true Chr08: 17238144-17242612 Glycine max
Glyma.08G213600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 17238144-17239143 Glycine max
Glyma.08G213600 2.0kb upstream 2.0kb upstream 5469 true Chr08: 17239144-17244612 Glycine max
Glyma.08G213600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 17242613-17244612 Glycine max
Glyma.08G213600 2.0kb downstream 2.0kb downstream 5469 true Chr08: 17237144-17242612 Glycine max
Glyma.08G213600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 17237144-17239143 Glycine max
Glyma.08G213600 5.0kb upstream 5.0kb upstream 8469 true Chr08: 17239144-17247612 Glycine max
Glyma.08G213600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 17242613-17247612 Glycine max
Glyma.08G213600 5.0kb downstream 5.0kb downstream 8469 true Chr08: 17234144-17242612 Glycine max
Glyma.08G213600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 17234144-17239143 Glycine max
Glyma.08G213600 10.0kb upstream 10.0kb upstream 13469 true Chr08: 17239144-17252612 Glycine max
Glyma.08G213600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 17242613-17252612 Glycine max
Glyma.08G213600 10.0kb downstream 10.0kb downstream 13469 true Chr08: 17229144-17242612 Glycine max
Glyma.08G213600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 17229144-17239143 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308589 5265 Fabidae View MSA
124067958 5270 Rosid View MSA
123743632 5271 Pentapetalae View MSA
122786990 5272 Eudicot View MSA
122048939 5273 Angiosperm View MSA
121348760 5274 Embryophyte View MSA
123426502 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.59757 0.0 25.7569    
cufflinks 7.08031 0.0 19.2845   Low
cufflinks 9.67994 0.0 25.9632    
cufflinks 9.54835 0.0 25.6175    
cufflinks 9.21348 0.0 24.7545    
cufflinks 13.0613 0.0 34.8474   High
cufflinks 10.305 0.0 27.6026    
cufflinks 10.0453 0.0 26.9106    
cufflinks 8.3066 0.0 22.4224    
cufflinks 7.226        
cufflinks 7.261     High  
cufflinks 6.225        
cufflinks 9.812     High High
cufflinks 10.434     High High
cufflinks 4.868        
cufflinks 5.182        
cufflinks 6.655     High  
cufflinks 5.679        
cufflinks 6.328        
cufflinks 4.158       Low
cufflinks 9.993     High High
cufflinks 4.325       Low
cufflinks 3.493       Low
cufflinks 11.055     High High
cufflinks 3.814       Low
cufflinks 10.659     High High

0 Strain