Gene : Glyma.08G218500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11671 - ATP SYNTHASE SUBUNIT D Genomic Order:  2185
Name:  ? Glyma.08G218500 Secondary Identifier:  ? PAC:30535897
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G218500 0.5kb upstream 0.5kb upstream 1974 true Chr08: 17769268-17771241 Glycine max
Glyma.08G218500 0.5kb upstream 0.5kb upstream 500 false Chr08: 17770742-17771241 Glycine max
Glyma.08G218500 0.5kb downstream 0.5kb downstream 1974 true Chr08: 17768768-17770741 Glycine max
Glyma.08G218500 0.5kb downstream 0.5kb downstream 500 false Chr08: 17768768-17769267 Glycine max
Glyma.08G218500 1.0kb upstream 1.0kb upstream 2474 true Chr08: 17769268-17771741 Glycine max
Glyma.08G218500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 17770742-17771741 Glycine max
Glyma.08G218500 1.0kb downstream 1.0kb downstream 2474 true Chr08: 17768268-17770741 Glycine max
Glyma.08G218500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 17768268-17769267 Glycine max
Glyma.08G218500 2.0kb upstream 2.0kb upstream 3474 true Chr08: 17769268-17772741 Glycine max
Glyma.08G218500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 17770742-17772741 Glycine max
Glyma.08G218500 2.0kb downstream 2.0kb downstream 3474 true Chr08: 17767268-17770741 Glycine max
Glyma.08G218500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 17767268-17769267 Glycine max
Glyma.08G218500 5.0kb upstream 5.0kb upstream 6474 true Chr08: 17769268-17775741 Glycine max
Glyma.08G218500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 17770742-17775741 Glycine max
Glyma.08G218500 5.0kb downstream 5.0kb downstream 6474 true Chr08: 17764268-17770741 Glycine max
Glyma.08G218500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 17764268-17769267 Glycine max
Glyma.08G218500 10.0kb upstream 10.0kb upstream 11474 true Chr08: 17769268-17780741 Glycine max
Glyma.08G218500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 17770742-17780741 Glycine max
Glyma.08G218500 10.0kb downstream 10.0kb downstream 11474 true Chr08: 17759268-17770741 Glycine max
Glyma.08G218500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 17759268-17769267 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301187 5265 Fabidae View MSA
124068581 5270 Rosid View MSA
123747153 5271 Pentapetalae View MSA
122793395 5272 Eudicot View MSA
122045398 5273 Angiosperm View MSA
121346383 5274 Embryophyte View MSA
123424080 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.2087 0.0 59.2518 High  
cufflinks 19.7458 0.0 52.7298   Low
cufflinks 22.38 0.0 59.7107 High  
cufflinks 22.3681 0.0 59.6754 High  
cufflinks 29.4213 0.0 78.988 High  
cufflinks 33.1274 0.0 89.1808 High High
cufflinks 34.0688 0.0 91.9349 High High
cufflinks 28.9768 0.0 77.5792 High  
cufflinks 20.7489 0.0 55.3645 High  
cufflinks 26.788     High High
cufflinks 24.326     High High
cufflinks 13.753     High Low
cufflinks 20.12     High  
cufflinks 23.106     High High
cufflinks 15.565     High  
cufflinks 18.124     High  
cufflinks 13.128     High Low
cufflinks 16.443     High  
cufflinks 18.007     High  
cufflinks 17.76     High  
cufflinks 22.076     High High
cufflinks 16.547     High  
cufflinks 15.734     High  
cufflinks 18.025     High  
cufflinks 17.478     High  
cufflinks 17.0     High  

0 Strain