Gene : Glyma.08G204700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR24326:SF272 - HOMEOBOX-LEUCINE ZIPPER PROTEIN GLABRA 2 Genomic Order:  2047
Name:  ? Glyma.08G204700 Secondary Identifier:  ? PAC:30536895
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G204700 0.5kb upstream 0.5kb upstream 6916 true Chr08: 16593592-16600507 Glycine max
Glyma.08G204700 0.5kb upstream 0.5kb upstream 500 false Chr08: 16593592-16594091 Glycine max
Glyma.08G204700 0.5kb downstream 0.5kb downstream 6916 true Chr08: 16594092-16601007 Glycine max
Glyma.08G204700 0.5kb downstream 0.5kb downstream 500 false Chr08: 16600508-16601007 Glycine max
Glyma.08G204700 1.0kb upstream 1.0kb upstream 7416 true Chr08: 16593092-16600507 Glycine max
Glyma.08G204700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 16593092-16594091 Glycine max
Glyma.08G204700 1.0kb downstream 1.0kb downstream 7416 true Chr08: 16594092-16601507 Glycine max
Glyma.08G204700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 16600508-16601507 Glycine max
Glyma.08G204700 2.0kb upstream 2.0kb upstream 8416 true Chr08: 16592092-16600507 Glycine max
Glyma.08G204700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 16592092-16594091 Glycine max
Glyma.08G204700 2.0kb downstream 2.0kb downstream 8416 true Chr08: 16594092-16602507 Glycine max
Glyma.08G204700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 16600508-16602507 Glycine max
Glyma.08G204700 5.0kb upstream 5.0kb upstream 11416 true Chr08: 16589092-16600507 Glycine max
Glyma.08G204700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 16589092-16594091 Glycine max
Glyma.08G204700 5.0kb downstream 5.0kb downstream 11416 true Chr08: 16594092-16605507 Glycine max
Glyma.08G204700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 16600508-16605507 Glycine max
Glyma.08G204700 10.0kb upstream 10.0kb upstream 16416 true Chr08: 16584092-16600507 Glycine max
Glyma.08G204700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 16584092-16594091 Glycine max
Glyma.08G204700 10.0kb downstream 10.0kb downstream 16416 true Chr08: 16594092-16610507 Glycine max
Glyma.08G204700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 16600508-16610507 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255281 5265 Fabidae View MSA
123997072 5270 Rosid View MSA
123571426 5271 Pentapetalae View MSA
122606152 5272 Eudicot View MSA
122048483 5273 Angiosperm View MSA
121350910 5274 Embryophyte View MSA
123381934 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.56868 0.0 4.90252    
cufflinks 2.73137 0.0 7.90809    
cufflinks 3.32768 0.0 9.39405    
cufflinks 4.44975 0.0 12.2404   High
cufflinks 0.126823 0.0 0.485647 Low Low
cufflinks 0.915826 0.0 3.08139    
cufflinks 0.653637 0.0 2.27926    
cufflinks 1.46334 0.0 4.61227    
cufflinks 0.195474 0.0 0.734222 Low Low
cufflinks 1.245        
cufflinks 0.322        
cufflinks 1.615        
cufflinks 0.059     Low Low
cufflinks 0.038     Low Low
cufflinks 0.009     Low Low
cufflinks 2.315        
cufflinks 0.254        
cufflinks 1.805        
cufflinks 3.499        
cufflinks 2.091        
cufflinks 0.216        
cufflinks 2.56        
cufflinks 4.556       High
cufflinks 0.772        
cufflinks 2.348        
cufflinks 0.433        

0 Strain