Gene : Glyma.08G205000 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10996//PTHR10996:SF139 - 2-HYDROXYACID DEHYDROGENASE-RELATED Genomic Order:  2050
Name:  ? Glyma.08G205000 Secondary Identifier:  ? PAC:30536151
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G205000 0.5kb upstream 0.5kb upstream 1436 true Chr08: 16608595-16610030 Glycine max
Glyma.08G205000 0.5kb upstream 0.5kb upstream 500 false Chr08: 16608595-16609094 Glycine max
Glyma.08G205000 0.5kb downstream 0.5kb downstream 1436 true Chr08: 16609095-16610530 Glycine max
Glyma.08G205000 0.5kb downstream 0.5kb downstream 500 false Chr08: 16610031-16610530 Glycine max
Glyma.08G205000 1.0kb upstream 1.0kb upstream 1936 true Chr08: 16608095-16610030 Glycine max
Glyma.08G205000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 16608095-16609094 Glycine max
Glyma.08G205000 1.0kb downstream 1.0kb downstream 1936 true Chr08: 16609095-16611030 Glycine max
Glyma.08G205000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 16610031-16611030 Glycine max
Glyma.08G205000 2.0kb upstream 2.0kb upstream 2936 true Chr08: 16607095-16610030 Glycine max
Glyma.08G205000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 16607095-16609094 Glycine max
Glyma.08G205000 2.0kb downstream 2.0kb downstream 2936 true Chr08: 16609095-16612030 Glycine max
Glyma.08G205000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 16610031-16612030 Glycine max
Glyma.08G205000 5.0kb upstream 5.0kb upstream 5936 true Chr08: 16604095-16610030 Glycine max
Glyma.08G205000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 16604095-16609094 Glycine max
Glyma.08G205000 5.0kb downstream 5.0kb downstream 5936 true Chr08: 16609095-16615030 Glycine max
Glyma.08G205000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 16610031-16615030 Glycine max
Glyma.08G205000 10.0kb upstream 10.0kb upstream 10936 true Chr08: 16599095-16610030 Glycine max
Glyma.08G205000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 16599095-16609094 Glycine max
Glyma.08G205000 10.0kb downstream 10.0kb downstream 10936 true Chr08: 16609095-16620030 Glycine max
Glyma.08G205000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 16610031-16620030 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122240465 5265 Fabidae Singleton cluster - no MSA
124050638 5270 Rosid View MSA
123747580 5271 Pentapetalae View MSA
122795035 5272 Eudicot View MSA
122051675 5273 Angiosperm View MSA
121344696 5274 Embryophyte View MSA
123427510 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.284259 0.0 1.15746    
cufflinks 0.486083 0.0 1.93629    
cufflinks 0.0439428 0.0 0.207449 Low Low
cufflinks 0.801763 0.0 3.134   High
cufflinks 0.29089 0.0 1.18134    
cufflinks 0.152876 0.0 0.647047 Low  
cufflinks 0.125425 0.0 0.538787 Low  
cufflinks 0.348538 0.0 1.40512    
cufflinks 0.281675 0.0 1.1472    
cufflinks 3.317       High
cufflinks 0.277        
cufflinks 1.244        
cufflinks 0.177        
cufflinks 0.259        
cufflinks 0.291        
cufflinks 0.51        
cufflinks 3.839       High
cufflinks 1.841       High
cufflinks 0.216        
cufflinks 0.441        
cufflinks 0.172        
cufflinks 0.305        
cufflinks 0.166        
cufflinks 0.168        
cufflinks 0.202        
cufflinks 0.525        

0 Strain