Gene : Glyma.08G205400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22999:SF19 - PHOX (PX) DOMAIN-CONTAINING PROTEIN Genomic Order:  2054
Name:  ? Glyma.08G205400 Secondary Identifier:  ? PAC:30535508
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G205400 0.5kb upstream 0.5kb upstream 8663 true Chr08: 16627852-16636514 Glycine max
Glyma.08G205400 0.5kb upstream 0.5kb upstream 500 false Chr08: 16627852-16628351 Glycine max
Glyma.08G205400 0.5kb downstream 0.5kb downstream 8663 true Chr08: 16628352-16637014 Glycine max
Glyma.08G205400 0.5kb downstream 0.5kb downstream 500 false Chr08: 16636515-16637014 Glycine max
Glyma.08G205400 1.0kb upstream 1.0kb upstream 9163 true Chr08: 16627352-16636514 Glycine max
Glyma.08G205400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 16627352-16628351 Glycine max
Glyma.08G205400 1.0kb downstream 1.0kb downstream 9163 true Chr08: 16628352-16637514 Glycine max
Glyma.08G205400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 16636515-16637514 Glycine max
Glyma.08G205400 2.0kb upstream 2.0kb upstream 10163 true Chr08: 16626352-16636514 Glycine max
Glyma.08G205400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 16626352-16628351 Glycine max
Glyma.08G205400 2.0kb downstream 2.0kb downstream 10163 true Chr08: 16628352-16638514 Glycine max
Glyma.08G205400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 16636515-16638514 Glycine max
Glyma.08G205400 5.0kb upstream 5.0kb upstream 13163 true Chr08: 16623352-16636514 Glycine max
Glyma.08G205400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 16623352-16628351 Glycine max
Glyma.08G205400 5.0kb downstream 5.0kb downstream 13163 true Chr08: 16628352-16641514 Glycine max
Glyma.08G205400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 16636515-16641514 Glycine max
Glyma.08G205400 10.0kb upstream 10.0kb upstream 18163 true Chr08: 16618352-16636514 Glycine max
Glyma.08G205400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 16618352-16628351 Glycine max
Glyma.08G205400 10.0kb downstream 10.0kb downstream 18163 true Chr08: 16628352-16646514 Glycine max
Glyma.08G205400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 16636515-16646514 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299063 5265 Fabidae View MSA
124061422 5270 Rosid View MSA
123739237 5271 Pentapetalae View MSA
122786426 5272 Eudicot View MSA
122041700 5273 Angiosperm View MSA
121349142 5274 Embryophyte View MSA
123426415 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.87152 0.0 18.3437    
cufflinks 5.94904 0.0 15.9212    
cufflinks 7.77302 0.0 20.7387   High
cufflinks 7.07158 0.0 18.8708    
cufflinks 4.59387 0.0 12.4227    
cufflinks 3.23516 0.0 8.95412   Low
cufflinks 6.90159 0.0 18.4277    
cufflinks 4.76899 0.0 12.86    
cufflinks 6.42928 0.0 17.1774    
cufflinks 2.607        
cufflinks 1.598       Low
cufflinks 6.888       High
cufflinks 2.981        
cufflinks 2.989        
cufflinks 2.827        
cufflinks 2.739        
cufflinks 2.541        
cufflinks 7.475     High High
cufflinks 4.285        
cufflinks 3.263        
cufflinks 1.777       Low
cufflinks 3.52        
cufflinks 4.149        
cufflinks 2.391        
cufflinks 2.88        
cufflinks 1.993       Low

0 Strain