Gene : Glyma.08G207000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12952 - SYS1 Genomic Order:  2070
Name:  ? Glyma.08G207000 Secondary Identifier:  ? PAC:30539428
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G207000 0.5kb upstream 0.5kb upstream 3908 true Chr08: 16720180-16724087 Glycine max
Glyma.08G207000 0.5kb upstream 0.5kb upstream 500 false Chr08: 16720180-16720679 Glycine max
Glyma.08G207000 0.5kb downstream 0.5kb downstream 3908 true Chr08: 16720680-16724587 Glycine max
Glyma.08G207000 0.5kb downstream 0.5kb downstream 500 false Chr08: 16724088-16724587 Glycine max
Glyma.08G207000 1.0kb upstream 1.0kb upstream 4408 true Chr08: 16719680-16724087 Glycine max
Glyma.08G207000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 16719680-16720679 Glycine max
Glyma.08G207000 1.0kb downstream 1.0kb downstream 4408 true Chr08: 16720680-16725087 Glycine max
Glyma.08G207000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 16724088-16725087 Glycine max
Glyma.08G207000 2.0kb upstream 2.0kb upstream 5408 true Chr08: 16718680-16724087 Glycine max
Glyma.08G207000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 16718680-16720679 Glycine max
Glyma.08G207000 2.0kb downstream 2.0kb downstream 5408 true Chr08: 16720680-16726087 Glycine max
Glyma.08G207000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 16724088-16726087 Glycine max
Glyma.08G207000 5.0kb upstream 5.0kb upstream 8408 true Chr08: 16715680-16724087 Glycine max
Glyma.08G207000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 16715680-16720679 Glycine max
Glyma.08G207000 5.0kb downstream 5.0kb downstream 8408 true Chr08: 16720680-16729087 Glycine max
Glyma.08G207000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 16724088-16729087 Glycine max
Glyma.08G207000 10.0kb upstream 10.0kb upstream 13408 true Chr08: 16710680-16724087 Glycine max
Glyma.08G207000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 16710680-16720679 Glycine max
Glyma.08G207000 10.0kb downstream 10.0kb downstream 13408 true Chr08: 16720680-16734087 Glycine max
Glyma.08G207000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 16724088-16734087 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029063 5273 Angiosperm View MSA
122308545 5265 Fabidae View MSA
124068023 5270 Rosid View MSA
123738308 5271 Pentapetalae View MSA
122789569 5272 Eudicot View MSA
121345746 5274 Embryophyte View MSA
123428394 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.802 0.0 45.7632    
cufflinks 11.9973 0.0 41.2016    
cufflinks 9.77385 0.0 34.7857   Low
cufflinks 12.277 0.0 39.1486    
cufflinks 12.9582 0.0 43.3658    
cufflinks 15.305 0.0 49.6377    
cufflinks 13.4281 0.0 48.6344    
cufflinks 20.2262 0.0 63.3557   High
cufflinks 11.1649 0.0 36.1105    
cufflinks 2.739       High
cufflinks 1.37        
cufflinks 1.865        
cufflinks 2.603        
cufflinks 3.078       High
cufflinks 0.757       Low
cufflinks 2.203        
cufflinks 1.252       Low
cufflinks 2.33        
cufflinks 2.569        
cufflinks 2.108        
cufflinks 1.281       Low
cufflinks 2.325        
cufflinks 1.997        
cufflinks 1.85        
cufflinks 2.155        
cufflinks 1.372        

0 Strain