Gene : Glyma.08G207200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR33510:SF6 - PROTEIN TIC 20-I, CHLOROPLASTIC Genomic Order:  2072
Name:  ? Glyma.08G207200 Secondary Identifier:  ? PAC:30540537
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G207200 0.5kb upstream 0.5kb upstream 2778 true Chr08: 16741172-16743949 Glycine max
Glyma.08G207200 0.5kb upstream 0.5kb upstream 500 false Chr08: 16741172-16741671 Glycine max
Glyma.08G207200 0.5kb downstream 0.5kb downstream 2778 true Chr08: 16741672-16744449 Glycine max
Glyma.08G207200 0.5kb downstream 0.5kb downstream 500 false Chr08: 16743950-16744449 Glycine max
Glyma.08G207200 1.0kb upstream 1.0kb upstream 3278 true Chr08: 16740672-16743949 Glycine max
Glyma.08G207200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 16740672-16741671 Glycine max
Glyma.08G207200 1.0kb downstream 1.0kb downstream 3278 true Chr08: 16741672-16744949 Glycine max
Glyma.08G207200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 16743950-16744949 Glycine max
Glyma.08G207200 2.0kb upstream 2.0kb upstream 4278 true Chr08: 16739672-16743949 Glycine max
Glyma.08G207200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 16739672-16741671 Glycine max
Glyma.08G207200 2.0kb downstream 2.0kb downstream 4278 true Chr08: 16741672-16745949 Glycine max
Glyma.08G207200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 16743950-16745949 Glycine max
Glyma.08G207200 5.0kb upstream 5.0kb upstream 7278 true Chr08: 16736672-16743949 Glycine max
Glyma.08G207200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 16736672-16741671 Glycine max
Glyma.08G207200 5.0kb downstream 5.0kb downstream 7278 true Chr08: 16741672-16748949 Glycine max
Glyma.08G207200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 16743950-16748949 Glycine max
Glyma.08G207200 10.0kb upstream 10.0kb upstream 12278 true Chr08: 16731672-16743949 Glycine max
Glyma.08G207200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 16731672-16741671 Glycine max
Glyma.08G207200 10.0kb downstream 10.0kb downstream 12278 true Chr08: 16741672-16753949 Glycine max
Glyma.08G207200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 16743950-16753949 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301693 5265 Fabidae View MSA
124062125 5270 Rosid View MSA
123738974 5271 Pentapetalae View MSA
122790107 5272 Eudicot View MSA
122051187 5273 Angiosperm View MSA
121344668 5274 Embryophyte View MSA
123427529 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 39.7642 0.0 120.891 High High
cufflinks 44.4725 0.0 156.167 High High
cufflinks 24.6321 0.0 73.1815 High  
cufflinks 20.9612 0.0 63.0413 High Low
cufflinks 23.7277 0.0 70.8984 High  
cufflinks 23.9484 0.0 71.2563 High  
cufflinks 26.8248 0.0 79.8169 High  
cufflinks 33.504 0.0 116.489 High  
cufflinks 22.5083 0.0 67.0181 High  
cufflinks 8.706     High  
cufflinks 2.545       Low
cufflinks 6.936        
cufflinks 5.328        
cufflinks 6.457        
cufflinks 2.309       Low
cufflinks 18.503     High High
cufflinks 3.718        
cufflinks 8.079     High  
cufflinks 10.3     High  
cufflinks 16.956     High High
cufflinks 3.011       Low
cufflinks 16.587     High High
cufflinks 19.938     High High
cufflinks 3.444        
cufflinks 17.981     High High
cufflinks 2.634       Low

0 Strain