Gene : Glyma.08G210000 G. max Wm82.a2.v1
Defline:  (1 of 4) KOG4547 - WD40 repeat-containing protein Genomic Order:  2100
Name:  ? Glyma.08G210000 Secondary Identifier:  ? PAC:30535563
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G210000 0.5kb upstream 0.5kb upstream 7499 true Chr08: 16997598-17005096 Glycine max
Glyma.08G210000 0.5kb upstream 0.5kb upstream 500 false Chr08: 16997598-16998097 Glycine max
Glyma.08G210000 0.5kb downstream 0.5kb downstream 7499 true Chr08: 16998098-17005596 Glycine max
Glyma.08G210000 0.5kb downstream 0.5kb downstream 500 false Chr08: 17005097-17005596 Glycine max
Glyma.08G210000 1.0kb upstream 1.0kb upstream 7999 true Chr08: 16997098-17005096 Glycine max
Glyma.08G210000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 16997098-16998097 Glycine max
Glyma.08G210000 1.0kb downstream 1.0kb downstream 7999 true Chr08: 16998098-17006096 Glycine max
Glyma.08G210000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 17005097-17006096 Glycine max
Glyma.08G210000 2.0kb upstream 2.0kb upstream 8999 true Chr08: 16996098-17005096 Glycine max
Glyma.08G210000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 16996098-16998097 Glycine max
Glyma.08G210000 2.0kb downstream 2.0kb downstream 8999 true Chr08: 16998098-17007096 Glycine max
Glyma.08G210000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 17005097-17007096 Glycine max
Glyma.08G210000 5.0kb upstream 5.0kb upstream 11999 true Chr08: 16993098-17005096 Glycine max
Glyma.08G210000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 16993098-16998097 Glycine max
Glyma.08G210000 5.0kb downstream 5.0kb downstream 11999 true Chr08: 16998098-17010096 Glycine max
Glyma.08G210000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 17005097-17010096 Glycine max
Glyma.08G210000 10.0kb upstream 10.0kb upstream 16999 true Chr08: 16988098-17005096 Glycine max
Glyma.08G210000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 16988098-16998097 Glycine max
Glyma.08G210000 10.0kb downstream 10.0kb downstream 16999 true Chr08: 16998098-17015096 Glycine max
Glyma.08G210000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 17005097-17015096 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297563 5265 Fabidae View MSA
124070647 5270 Rosid View MSA
123742846 5271 Pentapetalae View MSA
122770409 5272 Eudicot View MSA
122048492 5273 Angiosperm View MSA
121346834 5274 Embryophyte View MSA
123423807 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.55614 0.0 27.6254   High
cufflinks 6.08708 0.0 20.6462    
cufflinks 4.93938 0.0 17.4917    
cufflinks 4.72648 0.0 16.4109    
cufflinks 3.90142 0.0 14.7184   Low
cufflinks 4.26453 0.0 17.5837    
cufflinks 5.59239 0.0 22.2611    
cufflinks 4.76002 0.0 17.6535    
cufflinks 4.84107 0.0 18.6341    
cufflinks 1.956        
cufflinks 1.375       Low
cufflinks 2.269        
cufflinks 2.281        
cufflinks 2.739       High
cufflinks 1.945        
cufflinks 2.224        
cufflinks 1.48       Low
cufflinks 2.355        
cufflinks 2.888       High
cufflinks 2.231        
cufflinks 1.702        
cufflinks 2.303        
cufflinks 2.314        
cufflinks 2.083        
cufflinks 2.179        
cufflinks 1.577       Low

0 Strain