Gene : Glyma.08G211000 G. max Wm82.a2.v1
Defline:  (1 of 67) PF05553 - Cotton fibre expressed protein (DUF761) Genomic Order:  2110
Name:  ? Glyma.08G211000 Secondary Identifier:  ? PAC:30538455
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G211000 0.5kb upstream 0.5kb upstream 1112 true Chr08: 17043033-17044144 Glycine max
Glyma.08G211000 0.5kb upstream 0.5kb upstream 500 false Chr08: 17043033-17043532 Glycine max
Glyma.08G211000 0.5kb downstream 0.5kb downstream 1112 true Chr08: 17043533-17044644 Glycine max
Glyma.08G211000 0.5kb downstream 0.5kb downstream 500 false Chr08: 17044145-17044644 Glycine max
Glyma.08G211000 1.0kb upstream 1.0kb upstream 1612 true Chr08: 17042533-17044144 Glycine max
Glyma.08G211000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 17042533-17043532 Glycine max
Glyma.08G211000 1.0kb downstream 1.0kb downstream 1612 true Chr08: 17043533-17045144 Glycine max
Glyma.08G211000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 17044145-17045144 Glycine max
Glyma.08G211000 2.0kb upstream 2.0kb upstream 2612 true Chr08: 17041533-17044144 Glycine max
Glyma.08G211000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 17041533-17043532 Glycine max
Glyma.08G211000 2.0kb downstream 2.0kb downstream 2612 true Chr08: 17043533-17046144 Glycine max
Glyma.08G211000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 17044145-17046144 Glycine max
Glyma.08G211000 5.0kb upstream 5.0kb upstream 5612 true Chr08: 17038533-17044144 Glycine max
Glyma.08G211000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 17038533-17043532 Glycine max
Glyma.08G211000 5.0kb downstream 5.0kb downstream 5612 true Chr08: 17043533-17049144 Glycine max
Glyma.08G211000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 17044145-17049144 Glycine max
Glyma.08G211000 10.0kb upstream 10.0kb upstream 10612 true Chr08: 17033533-17044144 Glycine max
Glyma.08G211000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 17033533-17043532 Glycine max
Glyma.08G211000 10.0kb downstream 10.0kb downstream 10612 true Chr08: 17043533-17054144 Glycine max
Glyma.08G211000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 17044145-17054144 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312142 5265 Fabidae View MSA
124069839 5270 Rosid View MSA
123746410 5271 Pentapetalae View MSA
122795069 5272 Eudicot View MSA
122048129 5273 Angiosperm View MSA
121310856 5274 Embryophyte View MSA
123348241 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.216876 0.0 0.883509    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 19.9978 0.0 58.0516   High
cufflinks 0.140155 0.0 0.583804 Low  
cufflinks 0.591936 0.0 2.31796    
cufflinks 15.4172 0.0 46.8454   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.158336 0.0 0.655707 Low  
cufflinks 0.588096 0.0 2.30323    
cufflinks 0.049     Low Low
cufflinks 169.758     High High
cufflinks 8.347     High  
cufflinks 1.453        
cufflinks 5.671        
cufflinks 47.753     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.278       Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 22.962     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 80.801     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 15.522     High  

0 Strain