Gene : Glyma.08G199900 G. max Wm82.a2.v1
Defline:  (1 of 12) 3.4.24.64 - Mitochondrial processing peptidase / Processing enhancing peptidase Genomic Order:  1999
Name:  ? Glyma.08G199900 Secondary Identifier:  ? PAC:30539929
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-3781 Glycine max pathologic  
Gmax PWY-7279 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G199900 0.5kb upstream 0.5kb upstream 6209 true Chr08: 16145533-16151741 Glycine max
Glyma.08G199900 0.5kb upstream 0.5kb upstream 500 false Chr08: 16145533-16146032 Glycine max
Glyma.08G199900 0.5kb downstream 0.5kb downstream 6209 true Chr08: 16146033-16152241 Glycine max
Glyma.08G199900 0.5kb downstream 0.5kb downstream 500 false Chr08: 16151742-16152241 Glycine max
Glyma.08G199900 1.0kb upstream 1.0kb upstream 6709 true Chr08: 16145033-16151741 Glycine max
Glyma.08G199900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 16145033-16146032 Glycine max
Glyma.08G199900 1.0kb downstream 1.0kb downstream 6709 true Chr08: 16146033-16152741 Glycine max
Glyma.08G199900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 16151742-16152741 Glycine max
Glyma.08G199900 2.0kb upstream 2.0kb upstream 7709 true Chr08: 16144033-16151741 Glycine max
Glyma.08G199900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 16144033-16146032 Glycine max
Glyma.08G199900 2.0kb downstream 2.0kb downstream 7709 true Chr08: 16146033-16153741 Glycine max
Glyma.08G199900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 16151742-16153741 Glycine max
Glyma.08G199900 5.0kb upstream 5.0kb upstream 10709 true Chr08: 16141033-16151741 Glycine max
Glyma.08G199900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 16141033-16146032 Glycine max
Glyma.08G199900 5.0kb downstream 5.0kb downstream 10709 true Chr08: 16146033-16156741 Glycine max
Glyma.08G199900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 16151742-16156741 Glycine max
Glyma.08G199900 10.0kb upstream 10.0kb upstream 15709 true Chr08: 16136033-16151741 Glycine max
Glyma.08G199900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 16136033-16146032 Glycine max
Glyma.08G199900 10.0kb downstream 10.0kb downstream 15709 true Chr08: 16146033-16161741 Glycine max
Glyma.08G199900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 16151742-16161741 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041394 5273 Angiosperm View MSA
122308528 5265 Fabidae View MSA
124064083 5270 Rosid View MSA
123738249 5271 Pentapetalae View MSA
122789346 5272 Eudicot View MSA
121350423 5274 Embryophyte View MSA
123425006 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.1333 0.0 59.4026    
cufflinks 20.0596 0.0 53.6803    
cufflinks 14.0533 0.0 37.505   Low
cufflinks 26.4458 0.0 71.6153 High  
cufflinks 39.1707 0.0 109.3 High High
cufflinks 35.375 0.0 97.9052 High High
cufflinks 23.3304 0.0 62.7577 High  
cufflinks 23.0199 0.0 61.9099 High  
cufflinks 27.7417 0.0 75.3078 High  
cufflinks 11.926     High  
cufflinks 5.75     High  
cufflinks 7.842     High  
cufflinks 20.395     High High
cufflinks 24.046     High High
cufflinks 5.027        
cufflinks 4.93        
cufflinks 7.767     High  
cufflinks 8.983     High  
cufflinks 10.225     High  
cufflinks 4.521       Low
cufflinks 5.587        
cufflinks 4.927        
cufflinks 7.783     High  
cufflinks 7.046     High  
cufflinks 4.409       Low
cufflinks 7.3     High  

0 Strain