Gene : Glyma.08G200500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10682//PTHR10682:SF24 - POLY A POLYMERASE Genomic Order:  2005
Name:  ? Glyma.08G200500 Secondary Identifier:  ? PAC:30540115
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G200500 0.5kb upstream 0.5kb upstream 5720 true Chr08: 16216620-16222339 Glycine max
Glyma.08G200500 0.5kb upstream 0.5kb upstream 500 false Chr08: 16216620-16217119 Glycine max
Glyma.08G200500 0.5kb downstream 0.5kb downstream 5720 true Chr08: 16217120-16222839 Glycine max
Glyma.08G200500 0.5kb downstream 0.5kb downstream 500 false Chr08: 16222340-16222839 Glycine max
Glyma.08G200500 1.0kb upstream 1.0kb upstream 6220 true Chr08: 16216120-16222339 Glycine max
Glyma.08G200500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 16216120-16217119 Glycine max
Glyma.08G200500 1.0kb downstream 1.0kb downstream 6220 true Chr08: 16217120-16223339 Glycine max
Glyma.08G200500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 16222340-16223339 Glycine max
Glyma.08G200500 2.0kb upstream 2.0kb upstream 7220 true Chr08: 16215120-16222339 Glycine max
Glyma.08G200500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 16215120-16217119 Glycine max
Glyma.08G200500 2.0kb downstream 2.0kb downstream 7220 true Chr08: 16217120-16224339 Glycine max
Glyma.08G200500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 16222340-16224339 Glycine max
Glyma.08G200500 5.0kb upstream 5.0kb upstream 10220 true Chr08: 16212120-16222339 Glycine max
Glyma.08G200500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 16212120-16217119 Glycine max
Glyma.08G200500 5.0kb downstream 5.0kb downstream 10220 true Chr08: 16217120-16227339 Glycine max
Glyma.08G200500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 16222340-16227339 Glycine max
Glyma.08G200500 10.0kb upstream 10.0kb upstream 15220 true Chr08: 16207120-16222339 Glycine max
Glyma.08G200500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 16207120-16217119 Glycine max
Glyma.08G200500 10.0kb downstream 10.0kb downstream 15220 true Chr08: 16217120-16232339 Glycine max
Glyma.08G200500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 16222340-16232339 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309530 5265 Fabidae View MSA
124066442 5270 Rosid View MSA
123745238 5271 Pentapetalae View MSA
122790232 5272 Eudicot View MSA
122045017 5273 Angiosperm View MSA
123429108 5275 Viridiplantae View MSA
121348362 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 51.3395 0.0 157.297 High High
cufflinks 20.929 0.0 57.324 High  
cufflinks 57.8814 0.0 182.011 High High
cufflinks 25.8225 0.0 72.085 High  
cufflinks 22.2755 0.0 61.2828 High  
cufflinks 17.0272 0.0 46.046   Low
cufflinks 21.0409 0.0 57.5914    
cufflinks 22.3951 0.0 61.6994 High  
cufflinks 25.469 0.0 71.0125 High  
cufflinks 18.241     High Low
cufflinks 64.964     High High
cufflinks 35.003     High  
cufflinks 15.21     High Low
cufflinks 14.904     High Low
cufflinks 65.786     High High
cufflinks 25.285     High  
cufflinks 44.494     High  
cufflinks 35.724     High  
cufflinks 22.596     High  
cufflinks 38.567     High  
cufflinks 63.02     High High
cufflinks 34.457     High  
cufflinks 25.191     High  
cufflinks 56.249     High  
cufflinks 32.426     High  
cufflinks 59.992     High High

0 Strain