Gene : Glyma.08G201700 G. max Wm82.a2.v1
Defline:  (1 of 67) PF05553 - Cotton fibre expressed protein (DUF761) Genomic Order:  2017
Name:  ? Glyma.08G201700 Secondary Identifier:  ? PAC:30537759
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G201700 0.5kb upstream 0.5kb upstream 1076 true Chr08: 16354540-16355615 Glycine max
Glyma.08G201700 0.5kb upstream 0.5kb upstream 500 false Chr08: 16355116-16355615 Glycine max
Glyma.08G201700 0.5kb downstream 0.5kb downstream 1076 true Chr08: 16354040-16355115 Glycine max
Glyma.08G201700 0.5kb downstream 0.5kb downstream 500 false Chr08: 16354040-16354539 Glycine max
Glyma.08G201700 1.0kb upstream 1.0kb upstream 1576 true Chr08: 16354540-16356115 Glycine max
Glyma.08G201700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 16355116-16356115 Glycine max
Glyma.08G201700 1.0kb downstream 1.0kb downstream 1576 true Chr08: 16353540-16355115 Glycine max
Glyma.08G201700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 16353540-16354539 Glycine max
Glyma.08G201700 2.0kb upstream 2.0kb upstream 2576 true Chr08: 16354540-16357115 Glycine max
Glyma.08G201700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 16355116-16357115 Glycine max
Glyma.08G201700 2.0kb downstream 2.0kb downstream 2576 true Chr08: 16352540-16355115 Glycine max
Glyma.08G201700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 16352540-16354539 Glycine max
Glyma.08G201700 5.0kb upstream 5.0kb upstream 5576 true Chr08: 16354540-16360115 Glycine max
Glyma.08G201700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 16355116-16360115 Glycine max
Glyma.08G201700 5.0kb downstream 5.0kb downstream 5576 true Chr08: 16349540-16355115 Glycine max
Glyma.08G201700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 16349540-16354539 Glycine max
Glyma.08G201700 10.0kb upstream 10.0kb upstream 10576 true Chr08: 16354540-16365115 Glycine max
Glyma.08G201700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 16355116-16365115 Glycine max
Glyma.08G201700 10.0kb downstream 10.0kb downstream 10576 true Chr08: 16344540-16355115 Glycine max
Glyma.08G201700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 16344540-16354539 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298873 5265 Fabidae View MSA
124070746 5270 Rosid View MSA
123749628 5271 Pentapetalae View MSA
122795982 5272 Eudicot View MSA
122049050 5273 Angiosperm View MSA
121311224 5274 Embryophyte View MSA
123348548 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.806106 0.0 3.10045    
cufflinks 0.8917 0.0 3.41731    
cufflinks 0.60843 0.0 2.37463    
cufflinks 1.08116 0.0 4.10488    
cufflinks 1.74294 0.0 6.44803    
cufflinks 0.265393 0.0 1.06541 Low Low
cufflinks 1.29872 0.0 4.87319    
cufflinks 0.499294 0.0 1.95595    
cufflinks 3.16261 0.0 11.3222   High
cufflinks 0.382       Low
cufflinks 1.55        
cufflinks 2.912        
cufflinks 3.992        
cufflinks 0.347       Low
cufflinks 5.313     High  
cufflinks 0.413        
cufflinks 126.339     High High
cufflinks 5.806        
cufflinks 1.128        
cufflinks 0.435        
cufflinks 4.011        
cufflinks 0.919        
cufflinks 1.442        
cufflinks 2.002        
cufflinks 0.264       Low
cufflinks 16.241     High High

0 Strain